RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 ARHGEF4Q9NR80 690 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TMPRSS4Q9NRS4 437 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 MUTYHQ9UIF7 546 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TTC7AQ9ULT0 858 aaPredicted RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 MUC22E2RYF6 1773 aaPredicted RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TECTAO75443 2155 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 hCG_1818297A0A087WSY0 165 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 SHISA7A6NL88 538 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 CHURC1-FNTBB4DL54 471 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 DAPK3O43293 454 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 CREB3O43889 395 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TSPAN3O60637 253 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 RAMP2O60895 175 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 ATG13O75143 517 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 CNTN5O94779 1100 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TJP3O95049 919 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 KRT1P04264 644 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 ATP5BP06576 529 aaKnown RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 RHOCP08134 193 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 PABPC1P11940 636 aaKnown RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TCP1P17987 556 aaKnown RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 MX2P20592 715 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TGM2P21980 687 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 SGSHP51688 502 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 CLCN6P51797 869 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 NUBP1P53384 320 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 MRPS21P82921 87 aaKnown RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 GNA12Q03113 381 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 XRCC4Q13426 336 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 ENPP2Q13822 863 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 CCINQ13939 588 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 PLEKHG6Q3KR16 790 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 ATP13A4Q4VNC1 1196 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 ALFQ53S48 1182 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 INO80DQ53TQ3 878 aaPredicted RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 ZNF569Q5MCW4 686 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 DAB2IPQ5VWQ8 1189 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 RETSATQ6NUM9 610 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 RWDD4Q6NW29 188 aaKnown RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 MFSD7Q6UXD7 560 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 SPOCD1Q6ZMY3 1216 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TRIM67Q6ZTA4 783 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TPRG1Q6ZUI0 275 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 NYAP1Q6ZVC0 841 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 BBS12Q6ZW61 710 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TRMT11Q7Z4G4 463 aaKnown RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 ZNF687Q8N1G0 1237 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 CARNMT1Q8N4J0 409 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 DCAF4L2Q8NA75 395 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TTC13Q8NBP0 860 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 PCDH19Q8TAB3 1148 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 MAIP1Q8WWC4 291 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 RAPGEF5Q92565 580 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 KRT35Q92764 455 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 CLDN23Q96B33 292 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 MYEOVQ96EZ4 313 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 ALG14Q96F25 216 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 P2RY11Q96G91 374 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 PBKQ96KB5 322 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 ZNF599Q96NL3 588 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TSGA13Q96PP4 275 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 FEM1AQ9BSK4 669 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 C2orf49Q9BVC5 232 aaPredicted RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TLR10Q9BXR5 811 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 CALN1Q9BXU9 219 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 ACE2Q9BYF1 805 aaPredicted RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 FRMD8P1Q9BZ68 369 aaPredicted RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 KLC2Q9H0B6 622 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 GOLPH3Q9H4A6 298 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 LRRC19Q9H756 370 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 LTB4R2Q9NPC1 389 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 HEBP1Q9NRV9 189 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 DNAJC17Q9NVM6 304 aaKnown RBP6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 GPATCH2LQ9NWQ4 482 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 MPP6Q9NZW5 540 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 RNF14Q9UBS8 474 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 AMACRQ9UHK6 382 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 GGA2Q9UJY4 613 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 FBXL21Q9UKT6 434 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 OR51B4Q9Y5P0 310 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 BDP1A6H8Y1 2624 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 SHROOM3Q8TF72 1996 aa6.53□□□□□ -1.36
IGHV4-55-201ENST00000520889 TTC28Q96AY4 2481 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 COL6A3P12111 3177 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 KRBA1A5PL33 1030 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 ARHGAP42A6NI28 874 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 USP27XA6NNY8 438 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 HACD1B0YJ81 288 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 APOC4-APOC2K7ER74 178 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 TNFRSF10AO00220 468 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 APOL1O14791 398 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 SCAMP3O14828 347 aaKnown RBP6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 KDELR3O43731 214 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 FTCDO95954 541 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 APOC2P02655 101 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 CD48P09326 243 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 CHRNB1P11230 501 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 POLR2EP19388 210 aaKnown RBP6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 CCNCP24863 283 aa6.52□□□□□ -1.37
IGHV4-55-201ENST00000520889 CD70P32970 193 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms