RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 MCIDASD6RGH6 385 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 H7C1Q1 480 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 CLIC1O00299 241 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 DOK2O60496 412 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 PTP4A3O75365 173 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 CCNDBP1O95273 360 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 CHRM4P08173 479 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 ELFN1P0C7U0 828 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 ALOX12P18054 663 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 TGM2P21980 687 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 ADRA1BP35368 520 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 BSGP35613 385 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 ARL3P36405 182 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 MTNR1AP48039 350 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 SHC2P98077 582 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 DGCR2P98153 550 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 NUCB1Q02818 461 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 MAMLD1Q13495 774 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 KCNB1Q14721 858 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 CCNG2Q16589 344 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 FNDC7Q5VTL7 733 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 MTFR2Q6P444 385 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 VSTM1Q6UX27 236 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 DCDC5Q6ZRR9 648 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 CCDC129Q6ZRS4 1044 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 SLC29A4Q7RTT9 530 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 PXKQ7Z7A4 578 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 MON1AQ86VX9 555 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 ULK2Q8IYT8 1036 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 EXD3Q8N9H8 876 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 DAZAP1Q96EP5 407 aaKnown RBP5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 SAAL1Q96ER3 474 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 P2RY11Q96G91 374 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 BBC3Q96PG8 261 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 HDHD5Q9BXW7 423 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 USP44Q9H0E7 712 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 LMAN2LQ9H0V9 348 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 EPHX3Q9H6B9 360 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 CYP4F11Q9HBI6 524 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 ERVK-5Q9HDB9 667 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 ASNSD1Q9NWL6 643 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 ASIC5Q9NY37 505 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 MPP6Q9NZW5 540 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 FOXJ2Q9P0K8 574 aa5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 EPN1Q9Y6I3 576 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P46-201ENST00000520062 C1QTNF3-AMACRE9PGA6 284 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 DSCR3O14972 297 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 SYN3O14994 580 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 HBP1O60381 514 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 TMCC2O75069 709 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 ENO1P06733 434 aaKnown RBP5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 ADH4P08319 380 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 RFPL3SP0C7P2 107 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 COX7A2P14406 83 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 MAKP20794 623 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 ABCD1P33897 745 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 CTSWP56202 376 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 CYP4F2P78329 520 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 TDGQ13569 410 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 SEMA3AQ14563 771 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 SH2D4BQ5SQS7 431 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 AADACL2Q6P093 401 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 TMEM200AQ86VY9 491 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 CCDC105Q8IYK2 499 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 CNOT9Q92600 299 aaKnown RBP5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 CAVIN3Q969G5 261 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 FYTTD1Q96QD9 318 aaKnown RBP5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 RANBP17Q9H2T7 1088 aaKnown RBP5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 GHITMQ9H3K2 345 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 MUC13Q9H3R2 512 aa5.76□□□□□ -1.49
HMGB1P46-201ENST00000520062 A0A1W2PQM1 296 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 TMEM247A6NEH6 219 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 NPIPB15A6NHN6 443 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 GTPBP1O00178 669 aaKnown RBP5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 PER2O15055 1255 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 FOXD2O60548 495 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 MLYCDO95822 493 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 URODP06132 367 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 GSTM2P28161 218 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 HOXD13P35453 343 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 MLH1P40692 756 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 RAD52P43351 418 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 HARS2P49590 506 aaKnown RBP5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 VPS41P49754 854 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 RARSP54136 660 aaKnown RBP5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 EIF3BP55884 814 aaKnown RBP5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 UFM1P61960 85 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 ZNF169Q14929 603 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 LSM12Q3MHD2 195 aaKnown RBP5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 FAM153CQ494X1 144 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 SPATS1Q496A3 300 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 CEP85Q6P2H3 762 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 TMEM65Q6PI78 240 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 TRIM72Q6ZMU5 477 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 RTL10Q7L3V2 364 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 RRM2BQ7LG56 351 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 GRASPQ7Z6J2 395 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 VPS52Q8N1B4 723 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 C2CD4CQ8TF44 421 aa5.75□□□□□ -1.49
HMGB1P46-201ENST00000520062 NSUN4Q96CB9 384 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms