RNA–Protein interactions for RNA: ENST00000517992.1

SNTB1-202, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTB1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-202ENST00000517992 SNX17Q15036 470 aa25.55■■□□□ 1.68
SNTB1-202ENST00000517992 TMCO4Q5TGY1 634 aa25.55■■□□□ 1.68
SNTB1-202ENST00000517992 PAQR9Q6ZVX9 377 aa25.55■■□□□ 1.68
SNTB1-202ENST00000517992 PID1Q7Z2X4 250 aa25.55■■□□□ 1.68
SNTB1-202ENST00000517992 TMEM135Q86UB9 458 aa25.55■■□□□ 1.68
SNTB1-202ENST00000517992 RNF217Q8TC41 542 aa25.55■■□□□ 1.68
SNTB1-202ENST00000517992 CEP41Q9BYV8 373 aa25.55■■□□□ 1.68
SNTB1-202ENST00000517992 TMPRSS4Q9NRS4 437 aa25.55■■□□□ 1.68
SNTB1-202ENST00000517992 PIH1D1Q9NWS0 290 aaKnown RBP25.55■■□□□ 1.68
SNTB1-202ENST00000517992 TMEM216Q9P0N5 145 aa25.55■■□□□ 1.68
SNTB1-202ENST00000517992 KLHL8Q9P2G9 620 aaPredicted RBP25.55■■□□□ 1.68
SNTB1-202ENST00000517992 WASF2Q9Y6W5 498 aa25.55■■□□□ 1.68
SNTB1-202ENST00000517992 C9IYK1 514 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 MTSS1O43312 755 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 FKBP6O75344 327 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 PDHA1P08559 390 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 RALBP11234 206 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 PTPN3P26045 913 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 ADRA1BP35368 520 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 GJA9P57773 515 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 CLEC20AQ6ZU45 233 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 MAVSQ7Z434 540 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.54■■□□□ 1.68
SNTB1-202ENST00000517992 ZNF184Q99676 751 aaPredicted RBP25.54■■□□□ 1.68
SNTB1-202ENST00000517992 ARHGAP39Q9C0H5 1083 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 CASS4Q9NQ75 786 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 KRT82Q9NSB4 513 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 BFARQ9NZS9 450 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 SIN3BO75182 1162 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 USP1O94782 785 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 C6orf222P0C671 652 aaPredicted RBP25.54■■□□□ 1.68
SNTB1-202ENST00000517992 LINGO3P0C6S8 592 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 ANPEPP15144 967 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 MLH1P40692 756 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 IDH3AP50213 366 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 PPIDQ08752 370 aaKnown RBP25.54■■□□□ 1.68
SNTB1-202ENST00000517992 AAGABQ6PD74 315 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 GORASP1Q9BQQ3 440 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 RNF39Q9H2S5 420 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 GOLGA2P5Q9HBQ8 144 aa25.54■■□□□ 1.68
SNTB1-202ENST00000517992 MYO18AQ92614 2054 aaKnown RBP25.53■■□□□ 1.68
SNTB1-202ENST00000517992 ZNF195O14628 629 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 GABRDO14764 452 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 CPA3P15088 417 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 C1orf146Q5VVC0 180 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 SYPL2Q5VXT5 272 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 ADGRG6Q86SQ4 1221 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 FCRL3Q96P31 734 aaPredicted RBP25.53■■□□□ 1.68
SNTB1-202ENST00000517992 VANGL2Q9ULK5 521 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 PCDHB12Q9Y5F1 795 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 A0A088AWK7 358 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 MPOP05164 745 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 ZNF135P52742 658 aaPredicted RBP25.53■■□□□ 1.68
SNTB1-202ENST00000517992 COPAP53621 1224 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 HIC1Q14526 733 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 DCLK2Q8N568 766 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 OR52K1Q8NGK4 314 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 CLPTM1LQ96KA5 538 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 VCXQ9H320 206 aa25.53■■□□□ 1.68
SNTB1-202ENST00000517992 SYNJ2BP-COX16A0A087WUM0 186 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 ADCY6O43306 1168 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 BEST1O76090 585 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 ERCC2P18074 760 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 ADAM17P78536 824 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 CAP1Q01518 475 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 NME3Q13232 169 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 PPM1JQ5JR12 505 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 KCTD11Q693B1 232 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 TMEM40Q8WWA1 233 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 ZNF669Q96BR6 464 aaPredicted RBP25.52■■□□□ 1.68
SNTB1-202ENST00000517992 PGAP3Q96FM1 320 aaPredicted RBP25.52■■□□□ 1.68
SNTB1-202ENST00000517992 COX16Q9P0S2 106 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 TRHDEQ9UKU6 1024 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 CDY2AQ9Y6F7 541 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 CDY1Q9Y6F8 540 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 DPPA5A6NC42 116 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 TMEM114B3SHH9 223 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 CLDN5O00501 218 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 CCNT2O60583 730 aaKnown RBP25.52■■□□□ 1.68
SNTB1-202ENST00000517992 H2AFYO75367 372 aaKnown RBP25.52■■□□□ 1.68
SNTB1-202ENST00000517992 FAM200BP0CF97 657 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 PRDX6P30041 224 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 TKTL1P51854 596 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 GSTA3Q16772 222 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 CLEC14AQ86T13 490 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 NETO2Q8NC67 525 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 GBA3Q9H227 469 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 WDR6Q9NNW5 1121 aaKnown RBP25.52■■□□□ 1.68
SNTB1-202ENST00000517992 PNPOQ9NVS9 261 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 NDE1Q9NXR1 346 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 DDX43Q9NXZ2 648 aaKnown RBP25.52■■□□□ 1.68
SNTB1-202ENST00000517992 IPPQ9Y573 584 aa25.52■■□□□ 1.68
SNTB1-202ENST00000517992 ZNF638Q14966 1978 aaKnown RBP25.51■■□□□ 1.67
SNTB1-202ENST00000517992 MAGEB16A2A368 324 aa25.51■■□□□ 1.67
SNTB1-202ENST00000517992 SKAP2O75563 359 aaPredicted RBP25.51■■□□□ 1.67
SNTB1-202ENST00000517992 NEBLO76041 1014 aa25.51■■□□□ 1.67
SNTB1-202ENST00000517992 NDUFV1P49821 464 aa25.51■■□□□ 1.67
SNTB1-202ENST00000517992 CSE1LP55060 971 aaKnown RBP25.51■■□□□ 1.67
SNTB1-202ENST00000517992 ZCWPW2A0A1B0GU75 182 aa25.51■■□□□ 1.67
SNTB1-202ENST00000517992 KCNK1O00180 336 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms