RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 GAD2Q05329 585 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 LAMTOR4Q0VGL1 99 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CBX3Q13185 183 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 SQLEQ14534 574 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 DCAF6Q58WW2 860 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CYP2R1Q6VVX0 501 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CATSPER4Q7RTX7 472 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 NUP93Q8N1F7 819 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 DHRSXQ8N5I4 330 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 PCDH20Q8N6Y1 951 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CNTD1Q8N815 330 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 SPATA33Q96N06 139 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 PCDH18Q9HCL0 1135 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 SPAG4Q9NPE6 437 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 DOCK2Q92608 1830 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 COL14A1Q05707 1796 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ARAP2Q8WZ64 1704 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 A0A088AWK7 358 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CCDC78A2IDD5 438 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ERI2A8K979 691 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 PSMD12O00232 456 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CSPG5O95196 566 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 STAG3L1P0CL83 205 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CXCL8P10145 99 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 PRKCHP24723 683 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 GCAP28676 217 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 EPHA3P29320 983 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 GRIA4P48058 902 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 SCNN1BP51168 640 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 NAGLUP54802 743 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 MTTPP55157 894 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 RGS21Q2M5E4 152 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 KCTD21Q4G0X4 260 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 VWA5B1Q5TIE3 1220 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 TXNRD3NBQ6F5E7 133 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 STYK1Q6J9G0 422 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CES3Q6UWW8 571 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 FAM183BPQ6ZVS7 135 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CMASQ8NFW8 434 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 DIS3LQ8TF46 1054 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 GLMNQ92990 594 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 PRR11Q96HE9 360 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CPXM1Q96SM3 734 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 TCF12Q99081 682 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ACE2Q9BYF1 805 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 SMARCAD1Q9H4L7 1026 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ZDHHC7Q9NXF8 308 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 PHF24Q9UPV7 400 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 RREB1Q92766 1687 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 SLC15A5A6NIM6 579 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 C19orf81C9J6K1 198 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 TNPO2O14787 897 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 MGEA5O60502 916 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CSDE1O75534 798 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 GCATO75600 419 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CABYRO75952 493 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ANXA9O76027 345 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CFHP08603 1231 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF23P17027 643 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 SERPINB1P30740 379 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 TCF7P36402 384 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 EIF2B2P49770 351 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 BCAT1P54687 386 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CRADDP78560 199 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 PPIL2Q13356 520 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 TIFABQ6ZNK6 161 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 EFL1Q7Z2Z2 1120 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF467Q7Z7K2 595 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ACOT1Q86TX2 421 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 SLC22A9Q8IVM8 553 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 TNS4Q8IZW8 715 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 MARVELD2Q8N4S9 558 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CHST13Q8NET6 341 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 TMEM174Q8WUU8 243 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 OSCP1Q8WVF1 389 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 COX4I2Q96KJ9 171 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 BRD8Q9H0E9 1235 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ASB7Q9H672 318 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 PIH1D1Q9NWS0 290 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CSADQ9Y600 493 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 PHLPP1O60346 1717 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 SF3B1O75533 1304 aaKnown RBP eCLIP6.79□□□□□ -1.326e-6■■■■■ 103.4
CPNE3-203ENST00000517490 FAM159BA6NKW6 160 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ACKR2O00590 384 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 GRIN3BO60391 1043 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 FGFR3P22607 806 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 HMGCS2P54868 508 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 MSLNQ13421 630 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 SNX17Q15036 470 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 GADL1Q6ZQY3 521 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CDR2LQ86X02 465 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 OR6P1Q8NGX9 317 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 P2RX7Q99572 595 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 POPDC2Q9HBU9 364 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 AAR2Q9Y312 384 aaKnown RBP6.79□□□□□ -1.32
CPNE3-203ENST00000517490 C1orf232A0A0U1RR37 186 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 CXorf49A8MYA2 514 aaPredicted RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 H6PDO95479 791 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 NEK2P51955 445 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SLC25A11Q02978 314 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms