RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 LOC105369274A0A096LPK9 316 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 LOC102723532A0A0G2JNH3 316 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 DENND3A2RUS2 1198 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 IFITM10A6NMD0 228 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 KCNJ18B7U540 433 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 INAFM1C9JVW0 142 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MCIDASD6RGH6 385 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 M0QYT0 321 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 DHHO43323 396 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RGS14O43566 566 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 NCK2O43639 380 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PKMP14618 531 aaKnown RBP3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 IGFBP2P18065 325 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CYP3A7P24462 503 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 KLRC2P26717 231 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ART1P52961 327 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RPL15P61313 204 aaKnown RBP3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RBM6P78332 1123 aaKnown RBP3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ARL13AQ5H913 290 aaPredicted RBP3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 FSCBQ5H9T9 825 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 C9orf50Q5SZB4 431 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CCDC181Q5TID7 509 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CCDC25Q86WR0 208 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 OR4N4Q8N0Y3 316 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ZBTB8BQ8NAP8 495 aaPredicted RBP3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 DNASE2BQ8WZ79 361 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 IP6K1Q92551 441 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RIPOR3Q96MK2 946 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 NAA15Q9BXJ9 866 aaKnown RBP3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MAGEH1Q9H213 219 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TXNRD2Q9NNW7 524 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SLC52A1Q9NWF4 448 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ICAM5Q9UMF0 924 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ZBTB1Q9Y2K1 713 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PCDHGB1Q9Y5G3 927 aa3.14□□□□□ -1.91
RNU6-1088P-201ENST00000516850 A0A1B0GVT2 93 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MS4A18H0YCH9 400 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 VWA5AO00534 786 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 APAF1O14727 1248 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CAMTA2O94983 1202 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 LARGE1O95461 756 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 GLUD1P00367 558 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CYP3A4P08684 503 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 NBPF7P0C2Y1 421 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TRIM27P14373 513 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 GLUD2P49448 558 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 OAZ1P54368 228 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ZP1P60852 638 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 GPS2Q13227 327 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 HLTFQ14527 1009 aaKnown RBP eCLIP3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 SHBQ15464 509 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ASPHD1Q5U4P2 390 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 IZUMO3Q5VZ72 239 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MDGA2Q7Z553 956 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ANKS1BQ7Z6G8 1248 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PALB2Q86YC2 1186 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 GATAD2AQ86YP4 633 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PJA1Q8NG27 643 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MCRS1Q96EZ8 462 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CCDC136Q96JN2 1154 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CCDC138Q96M89 665 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PRPF18Q99633 342 aaKnown RBP3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 WDR77Q9BQA1 342 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 B3GNT4Q9C0J1 378 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CERS4Q9HA82 394 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ZNF304Q9HCX3 659 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PLSCR4Q9NRQ2 329 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 KLHL42Q9P2K6 505 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 FBXO4Q9UKT5 387 aa3.13□□□□□ -1.91
RNU6-1088P-201ENST00000516850 BTBD18B2RXH4 712 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RASA4BC9J798 803 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 STMND1H3BQB6 276 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PCDH17O14917 1159 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PIP5K1BO14986 540 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RASA4O43374 803 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 LIASO43766 372 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RPP40O75818 363 aaKnown RBP3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 IGKV3-20P01619 116 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 HLA-DQA2P01906 255 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PEPDP12955 493 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 NPPBP16860 134 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CHRNB2P17787 502 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 PCP4P48539 62 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CYP2J2P51589 502 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 Q0VFX4 171 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 HLFQ16534 295 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 LONRF1Q17RB8 773 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 KRTAP27-1Q3LI81 207 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 USP43Q70EL4 1123 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 RTL10Q7L3V2 364 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 TMEM200AQ86VY9 491 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 OR2C3Q8N628 320 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 EXD3Q8N9H8 876 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ENGASEQ8NFI3 743 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 CMASQ8NFW8 434 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 LMO3Q8TAP4 145 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 BICD2Q8TD16 824 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 HMGB4Q8WW32 186 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 MUL1Q969V5 352 aa3.12□□□□□ -1.91
RNU6-1088P-201ENST00000516850 ZNF333Q96JL9 665 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms