RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 OPRD1P41143 372 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 YBEYP58557 167 aaPredicted RBP21.54■■□□□ 1.04
LSM6-207ENST00000515311 SLC12A1Q13621 1099 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 PREPLQ4J6C6 727 aaPredicted RBP21.54■■□□□ 1.04
LSM6-207ENST00000515311 FSCBQ5H9T9 825 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 AFMIDQ63HM1 303 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 KAZNQ674X7 775 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 AADACL2Q6P093 401 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 C1orf228Q6PIY5 440 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 C12orf40Q86WS4 652 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 NPWQ8N729 165 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 PLD5Q8N7P1 536 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.54■■□□□ 1.04
LSM6-207ENST00000515311 NAT16Q8N8M0 369 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 WFDC5Q8TCV5 224 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 LMLNQ96KR4 655 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 HEMGNQ9BXL5 484 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 NDFIP2Q9NV92 336 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 KIAA1522Q9P206 1035 aaPredicted RBP21.54■■□□□ 1.04
LSM6-207ENST00000515311 DEC1Q9P2X7 70 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 CLEC4EQ9ULY5 219 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 SAR1BQ9Y6B6 198 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 PIAS3Q9Y6X2 628 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 CST8O60676 142 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 RAMP2O60895 175 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 RHOCP08134 193 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 CISD3P0C7P0 127 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 TGM2P21980 687 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 HLA-FP30511 346 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 ETFBP38117 255 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 DGKGP49619 791 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 PARP15Q460N3 678 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 GRAMD4Q6IC98 578 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 KIAA0907Q7Z7F0 614 aaPredicted RBP21.53■■□□□ 1.04
LSM6-207ENST00000515311 EXOC4Q96A65 974 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 HERPUD2Q9BSE4 406 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 MAGEH1Q9H213 219 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 NOL6Q9H6R4 1146 aaKnown RBP21.53■■□□□ 1.04
LSM6-207ENST00000515311 LRRC19Q9H756 370 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 CD320Q9NPF0 282 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 HEBP1Q9NRV9 189 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 TTC7AQ9ULT0 858 aaPredicted RBP21.53■■□□□ 1.04
LSM6-207ENST00000515311 MFHAS1Q9Y4C4 1052 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 RAD54BQ9Y620 910 aa21.53■■□□□ 1.04
LSM6-207ENST00000515311 CEP104O60308 925 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 SOX9P48436 509 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 NR2C2P49116 596 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 PLK1P53350 603 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 GNA12Q03113 381 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 ADCY2Q08462 1091 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 LMAN2Q12907 356 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 KLF1Q13351 362 aaPredicted RBP21.52■■□□□ 1.04
LSM6-207ENST00000515311 DMC1Q14565 340 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 LLGL1Q15334 1064 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 ASTLQ6HA08 431 aaPredicted RBP21.52■■□□□ 1.04
LSM6-207ENST00000515311 SLC13A5Q86YT5 568 aaPredicted RBP21.52■■□□□ 1.04
LSM6-207ENST00000515311 SUGP1Q8IWZ8 645 aaKnown RBP21.52■■□□□ 1.04
LSM6-207ENST00000515311 PHTF2Q8N3S3 785 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 RASGEF1CQ8N431 466 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 OR52K2Q8NGK3 314 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 PNKPQ96T60 521 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 FEM1AQ9BSK4 669 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 ABCB8Q9NUT2 735 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 WNT16Q9UBV4 365 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 GGA2Q9UJY4 613 aa21.52■■□□□ 1.04
LSM6-207ENST00000515311 NUP205Q92621 2012 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 APOC4-APOC2K7ER74 178 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 MFSD11O43934 449 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 APOC2P02655 101 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 CD70P32970 193 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 SLC6A11P48066 632 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 DYNLT1P63172 113 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 POLD3Q15054 466 aaPredicted RBP21.51■■□□□ 1.03
LSM6-207ENST00000515311 SLC44A4Q53GD3 710 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 RNF219Q5W0B1 726 aaPredicted RBP21.51■■□□□ 1.03
LSM6-207ENST00000515311 ARHGAP12Q8IWW6 846 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 WFIKKN2Q8TEU8 576 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 COG1Q8WTW3 980 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 ALG14Q96F25 216 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 MUC3BQ9H195 1237 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 OR51B4Q9Y5P0 310 aa21.51■■□□□ 1.03
LSM6-207ENST00000515311 NYNRINQ9P2P1 1898 aaKnown RBP21.51■■□□□ 1.03
LSM6-207ENST00000515311 FGGP02679 453 aa21.5■■□□□ 1.03
LSM6-207ENST00000515311 PABPC1P11940 636 aaKnown RBP21.5■■□□□ 1.03
LSM6-207ENST00000515311 CSKP41240 450 aa21.5■■□□□ 1.03
LSM6-207ENST00000515311 GBE1Q04446 702 aa21.5■■□□□ 1.03
LSM6-207ENST00000515311 MLF2Q15773 248 aaPredicted RBP21.5■■□□□ 1.03
LSM6-207ENST00000515311 BZW1Q7L1Q6 419 aaKnown RBP21.5■■□□□ 1.03
LSM6-207ENST00000515311 LRRC49Q8IUZ0 686 aa21.5■■□□□ 1.03
LSM6-207ENST00000515311 AHI1Q8N157 1196 aa21.5■■□□□ 1.03
LSM6-207ENST00000515311 ACTRT1Q8TDG2 376 aa21.5■■□□□ 1.03
LSM6-207ENST00000515311 MAIP1Q8WWC4 291 aa21.5■■□□□ 1.03
LSM6-207ENST00000515311 ARHGEF2Q92974 986 aaKnown RBP21.5■■□□□ 1.03
LSM6-207ENST00000515311 NECAB3Q96P71 396 aaPredicted RBP21.5■■□□□ 1.03
LSM6-207ENST00000515311 NAP1L3Q99457 506 aaPredicted RBP21.5■■□□□ 1.03
LSM6-207ENST00000515311 P2RY13Q9BPV8 354 aa21.5■■□□□ 1.03
LSM6-207ENST00000515311 DTLQ9NZJ0 730 aa21.5■■□□□ 1.03
LSM6-207ENST00000515311 MUTYHQ9UIF7 546 aa21.5■■□□□ 1.03
LSM6-207ENST00000515311 A0A0D9SEW6 157 aa21.49■■□□□ 1.03
LSM6-207ENST00000515311 ARHGAP42A6NI28 874 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms