RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CSH1P0DML2 217 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 CSH2P0DML3 217 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 MYOGP15173 224 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 RHOQP17081 205 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 PRKCHP24723 683 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 PTPN3P26045 913 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 GCAP28676 217 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 LSP1P33241 339 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 PPM1AP35813 382 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 ELK3P41970 407 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 GPR15P49685 360 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 TUBP50607 506 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 NDST2P52849 883 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 NRLP54845 237 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 GEMIN4P57678 1058 aaKnown RBP10.47□□□□□ -0.73
SNF8-214ENST00000515174 GNGT1P63211 74 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 CREMQ03060 361 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 TNK2Q07912 1038 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 AP1B1Q10567 949 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 FRG1Q14331 258 aaKnown RBP10.47□□□□□ -0.73
SNF8-214ENST00000515174 BBS9Q3SYG4 887 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 MGAT5BQ3V5L5 792 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 STEAP4Q687X5 459 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 NUGGCQ68CJ6 796 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 ITPRIPL1Q6GPH6 555 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 LEKR1Q6ZMV7 388 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 ZNF534Q76KX8 674 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 ZNF567Q8N184 647 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 UMODL1-AS1Q8N2C9 162 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 RTL3Q8N8U3 475 aaKnown RBP10.47□□□□□ -0.73
SNF8-214ENST00000515174 CCNYQ8ND76 341 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 TRMT2BQ96GJ1 504 aaKnown RBP10.47□□□□□ -0.73
SNF8-214ENST00000515174 TMEM169Q96HH4 297 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 TEKT5Q96M29 485 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 EBNA1BP2Q99848 306 aaKnown RBP10.47□□□□□ -0.73
SNF8-214ENST00000515174 CLSTN3Q9BQT9 956 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 WDR83Q9BRX9 315 aaKnown RBP10.47□□□□□ -0.73
SNF8-214ENST00000515174 VN1R3Q9BXE9 311 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 EPN3Q9H201 632 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 CRISPLD1Q9H336 500 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 VPS37BQ9H9H4 285 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 CERS4Q9HA82 394 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 SFMBT1Q9UHJ3 866 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 PCDHA11Q9Y5I1 949 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 HS3ST4Q9Y661 456 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 CDY1Q9Y6F8 540 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 MRPL42Q9Y6G3 142 aaKnown RBP10.47□□□□□ -0.73
SNF8-214ENST00000515174 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.47□□□□□ -0.73
SNF8-214ENST00000515174 MAGEB16A2A368 324 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 SDR42E2A6NKP2 422 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 E9PAM4 449 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 GOLGA8MH3BSY2 632 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 RFXAPO00287 272 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 MATN3O15232 486 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 LILRB3O75022 631 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 ALDH1A2O94788 518 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 C1RP00736 705 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 APOEP02649 317 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 C1QAP02745 245 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 ATF6P18850 670 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 STX2P32856 288 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 OR1D2P34982 312 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 ATP1A2P50993 1020 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 GAD2Q05329 585 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 KCTD11Q693B1 232 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 KIAA1841Q6NSI8 718 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 TIGD7Q6NT04 549 aaPredicted RBP10.46□□□□□ -0.73
SNF8-214ENST00000515174 PRSS55Q6UWB4 352 aaPredicted RBP10.46□□□□□ -0.73
SNF8-214ENST00000515174 LRRC31Q6UY01 552 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 B4GALNT4Q76KP1 1039 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 PID1Q7Z2X4 250 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 TRABD2AQ86V40 505 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 NLRP14Q86W24 1093 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 ARHGAP12Q8IWW6 846 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 TCEAL8Q8IYN2 117 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 TTC9BQ8N6N2 239 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 NPWQ8N729 165 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 UHMK1Q8TAS1 419 aaKnown RBP10.46□□□□□ -0.73
SNF8-214ENST00000515174 ALKBH8Q96BT7 664 aaKnown RBP10.46□□□□□ -0.73
SNF8-214ENST00000515174 ZBTB9Q96C00 473 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 B3GALT6Q96L58 329 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 PGLYRP2Q96PD5 576 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 IL12RB2Q99665 862 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 GBA3Q9H227 469 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 RXFP1Q9HBX9 757 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 TMEM248Q9NWD8 314 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 MARCH2Q9P0N8 246 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 PSMC3IPQ9P2W1 217 aaPredicted RBP10.46□□□□□ -0.73
SNF8-214ENST00000515174 ZNF180Q9UJW8 692 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 SLC27A5Q9Y2P5 690 aa10.46□□□□□ -0.73
SNF8-214ENST00000515174 ARIH1Q9Y4X5 557 aaPredicted RBP10.46□□□□□ -0.73
SNF8-214ENST00000515174 FAM86C2PA6NEL3 165 aa10.45□□□□□ -0.74
SNF8-214ENST00000515174 PRPF4O43172 522 aaKnown RBP eCLIP10.45□□□□□ -0.74
SNF8-214ENST00000515174 ADAM12O43184 909 aa10.45□□□□□ -0.74
SNF8-214ENST00000515174 MAFKO60675 156 aa10.45□□□□□ -0.74
SNF8-214ENST00000515174 MAP3K6O95382 1288 aa10.45□□□□□ -0.74
SNF8-214ENST00000515174 AP2A1O95782 977 aa10.45□□□□□ -0.74
SNF8-214ENST00000515174 HMGA1P17096 107 aaKnown RBP10.45□□□□□ -0.74
SNF8-214ENST00000515174 SSTR1P30872 391 aa10.45□□□□□ -0.74
SNF8-214ENST00000515174 HPDP32754 393 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms