RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 MDM1Q8TC05 714 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 SHC3Q92529 594 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 PPP1R13BQ96KQ4 1090 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 SLC2A13Q96QE2 648 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 OMDQ99983 421 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 FAM204AQ9H8W3 233 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 COX16Q9P0S2 106 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 APEX2Q9UBZ4 518 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 RWDD2AQ9UIY3 292 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 AJAP1Q9UKB5 411 aaPredicted RBP12.6□□□□□ -0.39
SNHG4-208ENST00000514110 FZD4Q9ULV1 537 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 PKD1L2Q7Z442 2459 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 TP53BP1Q12888 1972 aaPredicted RBP12.6□□□□□ -0.39
SNHG4-208ENST00000514110 LRRC72A6NJI9 287 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 WNT9AO14904 365 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 VILLO15195 856 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 IL1BP01584 269 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 GLI1P08151 1106 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 HOXB3P14651 431 aaPredicted RBP12.59□□□□□ -0.39
SNHG4-208ENST00000514110 ABCB4P21439 1286 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 C5AR1P21730 350 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 PON1P27169 355 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 CCR1P32246 355 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 GRK6P43250 576 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 METAP1P53582 386 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 ADPRHP54922 357 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 C21orf59P57076 290 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 CDK17Q00537 523 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 CENPCQ03188 943 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 SFSWAPQ12872 951 aaKnown RBP12.59□□□□□ -0.39
SNHG4-208ENST00000514110 EXOC3L4Q17RC7 722 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 FBXL22Q6P050 247 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 GBP6Q6ZN66 633 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 FAM183BPQ6ZVS7 135 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 SND1Q7KZF4 910 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNHG4-208ENST00000514110 OR52K2Q8NGK3 314 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 OR14C36Q8NHC7 312 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 ALG14Q96F25 216 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 ACE2Q9BYF1 805 aaPredicted RBP12.59□□□□□ -0.39
SNHG4-208ENST00000514110 SIX2Q9NPC8 291 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 ASNSD1Q9NWL6 643 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 DDIT4Q9NX09 232 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 SLC12A6Q9UHW9 1150 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 PCDHGC3Q9UN70 934 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 LHX6Q9UPM6 363 aa12.59□□□□□ -0.39
SNHG4-208ENST00000514110 A0A1B0GTQ1 180 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 A0A1B0GVM2 712 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 TCAF2A6NFQ2 919 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 PLK4O00444 970 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 LAMA5O15230 3695 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 TNFSF14O43557 240 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 HSF2BPO75031 334 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 ADH1BP00325 375 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 ERBB2P04626 1255 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 PNMA6AP0CW24 399 aaPredicted RBP12.58□□□□□ -0.4
SNHG4-208ENST00000514110 SLC2A3P11169 496 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 CD38P28907 300 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 DRD3P35462 400 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 GGCXP38435 758 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 CCR5P51681 352 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 PLK1P53350 603 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 SLC12A1Q13621 1099 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 AUHQ13825 339 aaKnown RBP12.58□□□□□ -0.4
SNHG4-208ENST00000514110 SHBQ15464 509 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 EFHC1Q5JVL4 640 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 RABGAP1LQ5R372 815 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 TTC39BQ5VTQ0 682 aaPredicted RBP12.58□□□□□ -0.4
SNHG4-208ENST00000514110 OR6B2Q6IFH4 312 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 LRSAM1Q6UWE0 723 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 OLFML1Q6UWY5 402 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 GATAD2AQ86YP4 633 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 C1orf131Q8NDD1 294 aaKnown RBP12.58□□□□□ -0.4
SNHG4-208ENST00000514110 FRS2Q8WU20 508 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 RNF34Q969K3 372 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 FAM81BQ96LP2 452 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 RPRD1AQ96P16 312 aaPredicted RBP12.58□□□□□ -0.4
SNHG4-208ENST00000514110 CCDC86Q9H6F5 360 aaKnown RBP12.58□□□□□ -0.4
SNHG4-208ENST00000514110 AASDHPPTQ9NRN7 309 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 SARDHQ9UL12 918 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 VANGL2Q9ULK5 521 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 FAM208BQ5VWN6 2430 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 ITPR1Q14643 2758 aa12.58□□□□□ -0.4
SNHG4-208ENST00000514110 A0A1W2PR77 199 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
SNHG4-208ENST00000514110 FAM149AA5PLN7 773 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 FOXN3O00409 490 aaPredicted RBP12.57□□□□□ -0.4
SNHG4-208ENST00000514110 DFNA5O60443 496 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 RTN2O75298 545 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 CLCN1P35523 988 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 NNMTP40261 264 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 PPP2CBP62714 309 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 PPP2CAP67775 309 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 PTK2Q05397 1052 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 SULT2A1Q06520 285 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 NME3Q13232 169 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 ELAVL3Q14576 367 aaKnown RBP12.57□□□□□ -0.4
SNHG4-208ENST00000514110 CCDC157Q569K6 752 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 OTUD1Q5VV17 481 aaPredicted RBP12.57□□□□□ -0.4
SNHG4-208ENST00000514110 C19orf48Q6RUI8 117 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms