RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 DRD3P35462 400 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 NNMTP40261 264 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 SLC11A2P49281 568 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 SGSHP51688 502 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 DLG4P78352 724 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 KCNMA1Q12791 1236 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 CLN3Q13286 438 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 ELAVL3Q14576 367 aaKnown RBP11.98□□□□□ -0.49
RNF4-216ENST00000511859 RFWD3Q6PCD5 774 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 CLEC14AQ86T13 490 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 STK40Q8N2I9 435 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 PTPRN2Q92932 1015 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 IFT43Q96FT9 208 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 DDX50Q9BQ39 737 aaKnown RBP11.98□□□□□ -0.49
RNF4-216ENST00000511859 ABCC13Q9NSE7 274 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 UCKL1Q9NWZ5 548 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 INTS6Q9UL03 887 aaKnown RBP11.98□□□□□ -0.49
RNF4-216ENST00000511859 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.98□□□□□ -0.49
RNF4-216ENST00000511859 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
RNF4-216ENST00000511859 SCAMP1O15126 338 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 PLRG1O43660 514 aaKnown RBP11.97□□□□□ -0.49
RNF4-216ENST00000511859 PIAS2O75928 621 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 HLA-DRAP01903 254 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 HSP90AA1P07900 732 aaKnown RBP11.97□□□□□ -0.49
RNF4-216ENST00000511859 THEGLP0DJG4 465 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 MZF1P28698 734 aaPredicted RBP11.97□□□□□ -0.49
RNF4-216ENST00000511859 PIK3CAP42336 1068 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 ECT2LQ008S8 904 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 SERINC3Q13530 473 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 RNF219Q5W0B1 726 aaPredicted RBP11.97□□□□□ -0.49
RNF4-216ENST00000511859 BSPRYQ5W0U4 402 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 NUGGCQ68CJ6 796 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 UNC13DQ70J99 1090 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 SLC9A9Q8IVB4 645 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 TTC39CQ8N584 583 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 ANKRD52Q8NB46 1076 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 WDR36Q8NI36 951 aaKnown RBP11.97□□□□□ -0.49
RNF4-216ENST00000511859 IFI44Q8TCB0 444 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 TMC2Q8TDI7 906 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 ATXN7L3BQ96GX2 97 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 C7orf25Q9BPX7 421 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 ULBP1Q9BZM6 244 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 DMAC2Q9NW81 257 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 NCKIPSDQ9NZQ3 722 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 STIM2Q9P246 746 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 SLCO3A1Q9UIG8 710 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 ATXN7L1Q9ULK2 861 aaPredicted RBP11.97□□□□□ -0.49
RNF4-216ENST00000511859 ENTPD2Q9Y5L3 495 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 TRPM6Q9BX84 2022 aa11.97□□□□□ -0.49
RNF4-216ENST00000511859 LY6G6EA0A0G2JKS1 128 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 EFSO43281 561 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 ACSL4O60488 711 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 TCEA3O75764 348 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 CD58P19256 250 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 TGM2P21980 687 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 ANP32AP39687 249 aaKnown RBP11.96□□□□□ -0.49
RNF4-216ENST00000511859 CUL4AQ13619 759 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 E2F4Q16254 413 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 FAM133BQ5BKY9 247 aaKnown RBP11.96□□□□□ -0.49
RNF4-216ENST00000511859 FAM46CQ5VWP2 391 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 ARHGAP17Q68EM7 881 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 RBM44Q6ZP01 1051 aaKnown RBP11.96□□□□□ -0.49
RNF4-216ENST00000511859 USP53Q70EK8 1073 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 DSG4Q86SJ6 1040 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 TMEM145Q8NBT3 493 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 HJURPQ8NCD3 748 aaPredicted RBP11.96□□□□□ -0.49
RNF4-216ENST00000511859 CCDC150Q8NCX0 1101 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 FAM174AQ8TBP5 190 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 SGF29Q96ES7 293 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 FAXDC2Q96IV6 333 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 IPO9Q96P70 1041 aaKnown RBP11.96□□□□□ -0.49
RNF4-216ENST00000511859 SPAG5Q96R06 1193 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 NIF3L1Q9GZT8 377 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 LRRC4Q9HBW1 653 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 CEP83Q9Y592 693 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 U3KQA8 63 aa11.96□□□□□ -0.49
RNF4-216ENST00000511859 NYNRINQ9P2P1 1898 aaKnown RBP11.96□□□□□ -0.49
RNF4-216ENST00000511859 TEP1Q99973 2627 aaKnown RBP11.96□□□□□ -0.5
RNF4-216ENST00000511859 GOLGA6L7A0A1B0GV03 622 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 K7ESM1 405 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 RTN2O75298 545 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 TNFSF15O95150 251 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 ITGA2BP08514 1039 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 SLC6A4P31645 630 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 HNRNPKP61978 463 aaKnown RBP eCLIP11.95□□□□□ -0.5
RNF4-216ENST00000511859 NFKB2Q00653 900 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 CEBPZQ03701 1054 aaKnown RBP11.95□□□□□ -0.5
RNF4-216ENST00000511859 CDH18Q13634 790 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 BECN1Q14457 450 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 SLC39A14Q15043 492 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 ZNF394Q53GI3 561 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 PITRM1Q5JRX3 1037 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 ZCCHC8Q6NZY4 707 aaKnown RBP11.95□□□□□ -0.5
RNF4-216ENST00000511859 NEK5Q6P3R8 708 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 BHLHA9Q7RTU4 235 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 DCP2Q8IU60 420 aaKnown RBP11.95□□□□□ -0.5
RNF4-216ENST00000511859 CARNMT1Q8N4J0 409 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 WDR48Q8TAF3 677 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 NDRG1Q92597 394 aaKnown RBP11.95□□□□□ -0.5
RNF4-216ENST00000511859 EDEM1Q92611 657 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms