RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CNTN5O94779 1100 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 COX7A2P14406 83 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 PKMP14618 531 aaKnown RBP5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 ENGP17813 658 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 CDH2P19022 906 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 HARS2P49590 506 aaKnown RBP5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 OAZ1P54368 228 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 EIF3BP55884 814 aaKnown RBP5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 EEFSECP57772 596 aaKnown RBP5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 UFM1P61960 85 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 POU5F1Q01860 360 aaKnown RBP5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 TAP1Q03518 808 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 CNGA3Q16281 694 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 GLE1Q53GS7 698 aaKnown RBP5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 FAM133BQ5BKY9 247 aaKnown RBP5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 SH2D4BQ5SQS7 431 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 LY6G5CQ5SRR4 150 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 AADACL2Q6P093 401 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 KRT74Q7RTS7 529 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 ZNF804AQ7Z570 1209 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 BRSK2Q8IWQ3 736 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 CXorf38Q8TB03 319 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 DVL3Q92997 716 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 SAAL1Q96ER3 474 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 HIC2Q96JB3 615 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 BDH2Q9BUT1 245 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 GATA5Q9BWX5 397 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 WDR11Q9BZH6 1224 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 HAUS2Q9NVX0 235 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 RAPGEFL1Q9UHV5 662 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 VPS4AQ9UN37 437 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 C16orf96A6NNT2 1141 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 MCIDASD6RGH6 385 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 GCOM1H8Y6P7 765 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 PER2O15055 1255 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 TTLL1O95922 423 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 MT-CO3P00414 261 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 C1SP09871 688 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 RFPL3SP0C7P2 107 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 NDUFB7P17568 137 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 PSMB10P40306 273 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 TDGQ13569 410 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 CCDC96Q2M329 555 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 NAPEPLDQ6IQ20 393 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 KCNV1Q6PIU1 500 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 KLHL24Q6TFL4 600 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 C17orf99Q6UX52 265 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 ENOSF1Q7L5Y1 443 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 BCDIN3DQ7Z5W3 292 aaKnown RBP5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 PEG10Q86TG7 708 aaKnown RBP5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 ULK2Q8IYT8 1036 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 MAFAQ8NHW3 353 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 PROKR1Q8TCW9 393 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 KCNG4Q8TDN1 519 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 CNOT9Q92600 299 aaKnown RBP5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 KCNJ9Q92806 393 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 C8orf49Q96NF6 230 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 BBC3Q96PG8 261 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 MMS19Q96T76 1030 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 LBHD1Q9BQE6 289 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 ADGRE3Q9BY15 652 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 TRIM31Q9BZY9 425 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 TTYH1Q9H313 450 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 TXNRD2Q9NNW7 524 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 EIF2B3Q9NR50 452 aaKnown RBP5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 HCFC1R1Q9NWW0 138 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 ASIC5Q9NY37 505 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 DTX4Q9Y2E6 619 aa5.89□□□□□ -1.47
HMGB1P47-201ENST00000511281 TAF4O00268 1085 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 QSOX1O00391 747 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 DSCR3O14972 297 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 FYB1O15117 783 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 SLC3A2P08195 630 aaKnown RBP5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 ADH4P08319 380 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 ALDOCP09972 364 aaKnown RBP5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 HKR1P10072 659 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 PORP16435 677 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 HOXA5P20719 270 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 TGM2P21980 687 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 ICAM3P32942 547 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 SHC2P98077 582 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 CREB5Q02930 508 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 DCTN2Q13561 401 aaKnown RBP5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 LARS2Q15031 903 aaKnown RBP5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 DUSP28Q4G0W2 176 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 SPDYAQ5MJ70 313 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 NEK8Q86SG6 692 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 TMEM200AQ86VY9 491 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 NEK9Q8TD19 979 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 C2CD4CQ8TF44 421 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 GPR78Q96P69 363 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 MLST8Q9BVC4 326 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 ERVK-5Q9HDB9 667 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 SEPT11Q9NVA2 429 aaKnown RBP5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 SMPD4Q9NXE4 827 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 SLCO3A1Q9UIG8 710 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 CDH22Q9UJ99 828 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 CLDN16Q9Y5I7 305 aa5.88□□□□□ -1.47
HMGB1P47-201ENST00000511281 C17orf113A0A1B0GUU1 675 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms