RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TMPRSS6Q8IU80 811 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 KIAA2013Q8IYS2 634 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 ABCA7Q8IZY2 2146 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 PYROXD2Q8N2H3 581 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 ALG14Q96F25 216 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 MYO19Q96H55 970 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 FEM1AQ9BSK4 669 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 TRIM5Q9C035 493 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 MUC3BQ9H195 1237 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 ISCUQ9H1K1 167 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 PRSS16Q9NQE7 514 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 OR12D3Q9UGF7 316 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 VPS28Q9UK41 221 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 CKAP5Q14008 2032 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 DMDP11532 3685 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 SPAG17Q6Q759 2223 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 IGLV3-10A0A075B6K4 115 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 TMEM191CA6NGB0 347 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 RETP07949 1114 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 TPM1P09493 284 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 HNRNPH3P31942 346 aaKnown RBP14.36□□□□□ -0.11
DDX41-212ENST00000511040 PLK1P53350 603 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 COPAP53621 1224 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 OXCT1P55809 520 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 GFPT1Q06210 699 aaPredicted RBP14.36□□□□□ -0.11
DDX41-212ENST00000511040 CAMK2GQ13555 558 aaPredicted RBP14.36□□□□□ -0.11
DDX41-212ENST00000511040 SLC12A1Q13621 1099 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 CCDC122Q5T0U0 273 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 ARMCX6Q7L4S7 300 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 SLFN11Q7Z7L1 901 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 DRC7Q8IY82 874 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 TMEFF1Q8IYR6 380 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 OR8K1Q8NGG5 319 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 OR2T3Q8NH03 318 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 TRIM11Q96F44 468 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 SIPA1Q96FS4 1042 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 ZC3H10Q96K80 434 aaKnown RBP14.36□□□□□ -0.11
DDX41-212ENST00000511040 DNAJC7Q99615 494 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 ZYG11BQ9C0D3 744 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 THAP2Q9H0W7 228 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 OSBPL2Q9H1P3 480 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 ARRDC1-AS1Q9H2J1 176 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 PARD6AQ9NPB6 346 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 GPATCH2LQ9NWQ4 482 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 TBC1D30Q9Y2I9 924 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 OR51B4Q9Y5P0 310 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 OTOGLQ3ZCN5 2332 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 FAM186AA6NE01 2351 aa14.36□□□□□ -0.11
DDX41-212ENST00000511040 RIF1Q5UIP0 2472 aaKnown RBP14.35□□□□□ -0.11
DDX41-212ENST00000511040 PTPRZ1P23471 2315 aaPredicted RBP14.35□□□□□ -0.11
DDX41-212ENST00000511040 THADAQ6YHU6 1953 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 IGHV1OR15-9A0A0B4J2B8 117 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 A0A0D9SEW6 157 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 SNAP91O60641 907 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 MFAP3LO75121 409 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 SIN3BO75182 1162 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 RHOBTB1O94844 696 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 LRIG2O94898 1065 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 SRPRAP08240 638 aaKnown RBP14.35□□□□□ -0.11
DDX41-212ENST00000511040 MYBL1P10243 752 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 VAV1P15498 845 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 OR1E1P30953 314 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 DHPSP49366 369 aaPredicted RBP14.35□□□□□ -0.11
DDX41-212ENST00000511040 BYSLQ13895 437 aaKnown RBP14.35□□□□□ -0.11
DDX41-212ENST00000511040 EFHC2Q5JST6 749 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 ACBD5Q5T8D3 534 aaPredicted RBP14.35□□□□□ -0.11
DDX41-212ENST00000511040 MANEALQ5VSG8 457 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 DAB2IPQ5VWQ8 1189 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 PMS2CLQ68D20 193 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 ALKBH5Q6P6C2 394 aaKnown RBP14.35□□□□□ -0.11
DDX41-212ENST00000511040 SARM1Q6SZW1 724 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 FAM124AQ86V42 546 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 ARFGAP1Q8N6T3 406 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 OR7D4Q8NG98 312 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 PRCCQ92733 491 aaPredicted RBP14.35□□□□□ -0.11
DDX41-212ENST00000511040 NTAN1Q96AB6 310 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 ARHGEF26Q96DR7 871 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 PSMB7Q99436 277 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 SPON2Q9BUD6 331 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 SMOC1Q9H4F8 434 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 ZNHIT6Q9NWK9 470 aaKnown RBP14.35□□□□□ -0.11
DDX41-212ENST00000511040 PPARGC1AQ9UBK2 798 aaKnown RBP14.35□□□□□ -0.11
DDX41-212ENST00000511040 ZNF212Q9UDV6 495 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 SUN2Q9UH99 717 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 PCSK1NQ9UHG2 260 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 FZD10Q9ULW2 581 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 USP18Q9UMW8 372 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 SCINQ9Y6U3 715 aa14.35□□□□□ -0.11
DDX41-212ENST00000511040 EP300Q09472 2414 aaPredicted RBP14.34□□□□□ -0.11
DDX41-212ENST00000511040 CREB3O43889 395 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 ZNF217O75362 1048 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 EPN2O95208 641 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 DESP17661 470 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 TGM1P22735 817 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 GLDCP23378 1020 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 RPS14P62263 151 aaKnown RBP14.34□□□□□ -0.11
DDX41-212ENST00000511040 NRG1Q02297 640 aaPredicted RBP14.34□□□□□ -0.11
DDX41-212ENST00000511040 RPL6Q02878 288 aaKnown RBP14.34□□□□□ -0.11
DDX41-212ENST00000511040 CREB5Q02930 508 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms