RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-208ENST00000510676 GPR27Q9NS67 375 aa11.17□□□□□ -0.62
PTCD2-208ENST00000510676 CLIC5Q9NZA1 410 aa11.17□□□□□ -0.62
PTCD2-208ENST00000510676 STOML2Q9UJZ1 356 aa11.17□□□□□ -0.62
PTCD2-208ENST00000510676 R3HCC1Q9Y3T6 440 aaKnown RBP11.17□□□□□ -0.62
PTCD2-208ENST00000510676 SDK2Q58EX2 2172 aa11.17□□□□□ -0.62
PTCD2-208ENST00000510676 DOCK9Q9BZ29 2069 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 HHLA1C9JL84 531 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 TPP1O14773 563 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 NME1P15531 152 aaKnown RBP11.16□□□□□ -0.62
PTCD2-208ENST00000510676 POLR2EP19388 210 aaKnown RBP11.16□□□□□ -0.62
PTCD2-208ENST00000510676 PRPHP41219 470 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 TRIM29Q14134 588 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 DUOXA2Q1HG44 320 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 TMEM119Q4V9L6 283 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 GPRIN1Q7Z2K8 1008 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 SCD5Q86SK9 330 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 HEATR4Q86WZ0 1026 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 OR13H1Q8NG92 308 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 TMEM159Q96B96 161 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 SAAL1Q96ER3 474 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 HEXIM2Q96MH2 286 aaKnown RBP11.16□□□□□ -0.62
PTCD2-208ENST00000510676 CCDC3Q9BQI4 270 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 EPB41L5Q9HCM4 733 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 PREBQ9HCU5 417 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 FOXJ2Q9P0K8 574 aa11.16□□□□□ -0.62
PTCD2-208ENST00000510676 ITIH6Q6UXX5 1313 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 C9orf172C9J069 976 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 D6RAR5 112 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 STAU1O95793 577 aaKnown RBP11.15□□□□□ -0.62
PTCD2-208ENST00000510676 CSF2P04141 144 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 JMJD7P0C870 316 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 PRF1P14222 555 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 GARTP22102 1010 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 PSMD8P48556 350 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 DRAP1Q14919 205 aaPredicted RBP11.15□□□□□ -0.62
PTCD2-208ENST00000510676 BMT2Q1RMZ1 405 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 ZNF720Q7Z2F6 126 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 TIPARPQ7Z3E1 657 aaKnown RBP11.15□□□□□ -0.62
PTCD2-208ENST00000510676 ABI3BPQ7Z7G0 1075 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 FAM114A1Q8IWE2 563 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 MED10Q9BTT4 135 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 FOXP1Q9H334 677 aaPredicted RBP11.15□□□□□ -0.62
PTCD2-208ENST00000510676 PISDQ9UG56 409 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 PCDHA5Q9Y5H7 936 aa11.15□□□□□ -0.62
PTCD2-208ENST00000510676 EDDM13A0A1B0GTR0 161 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 MUSKO15146 869 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 TNNC2P02585 160 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 ASLP04424 464 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 MZF1P28698 734 aaPredicted RBP11.14□□□□□ -0.63
PTCD2-208ENST00000510676 CD70P32970 193 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 RPIAP49247 311 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 ST8SIA6P61647 398 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 ZRSR1Q15695 479 aaKnown RBP11.14□□□□□ -0.63
PTCD2-208ENST00000510676 WDR72Q3MJ13 1102 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 POM121L1PQ3SYA9 428 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 MPP7Q5T2T1 576 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.14□□□□□ -0.63
PTCD2-208ENST00000510676 CCDC186Q7Z3E2 898 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 GPBP1Q86WP2 473 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 DCP2Q8IU60 420 aaKnown RBP11.14□□□□□ -0.63
PTCD2-208ENST00000510676 SLC35F3Q8IY50 421 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 WFDC5Q8TCV5 224 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 SRRTQ9BXP5 876 aaKnown RBP11.14□□□□□ -0.63
PTCD2-208ENST00000510676 PNPLA8Q9NP80 782 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 PDRG1Q9NUG6 133 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 DNAJC28Q9NX36 388 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 NAGPAQ9UK23 515 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 LOXL2Q9Y4K0 774 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 SHANK1Q9Y566 2161 aa11.14□□□□□ -0.63
PTCD2-208ENST00000510676 CST3P01034 146 aaPredicted RBP11.13□□□□□ -0.63
PTCD2-208ENST00000510676 LDLRP01130 860 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 ITIH1P19827 911 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 ETV5P41161 510 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 KIF11P52732 1056 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 MAP3K7CLP57077 242 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 TNNC1P63316 161 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 KCNA1Q09470 495 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 FZD2Q14332 565 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 ELAVL3Q14576 367 aaKnown RBP11.13□□□□□ -0.63
PTCD2-208ENST00000510676 TRIP4Q15650 581 aaPredicted RBP11.13□□□□□ -0.63
PTCD2-208ENST00000510676 ZNF542PQ5EBM4 170 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 AGBL4Q5VU57 503 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 DTHD1Q6ZMT9 781 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 SV2AQ7L0J3 742 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 TRAPPC11Q7Z392 1133 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 WDR49Q8IV35 697 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 FAM174AQ8TBP5 190 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 GPBAR1Q8TDU6 330 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 NKD1Q969G9 470 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 PLD4Q96BZ4 506 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 TMA16Q96EY4 203 aaKnown RBP11.13□□□□□ -0.63
PTCD2-208ENST00000510676 TNIP3Q96KP6 325 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 TMEM74Q96NL1 305 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 NOX5Q96PH1 765 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 CALN1Q9BXU9 219 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
PTCD2-208ENST00000510676 FOXP3Q9BZS1 431 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 PRDM8Q9NQV8 689 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 KIF3AQ9Y496 699 aa11.13□□□□□ -0.63
PTCD2-208ENST00000510676 NBEAL1Q6ZS30 2694 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms