RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ZSCAN16Q9H4T2 348 aaPredicted RBP9.05□□□□□ -0.96
COL4A3BP-206ENST00000508809 CBX8Q9HC52 389 aa9.05□□□□□ -0.96
COL4A3BP-206ENST00000508809 CD93Q9NPY3 652 aa9.05□□□□□ -0.96
COL4A3BP-206ENST00000508809 DMAC2Q9NW81 257 aa9.05□□□□□ -0.96
COL4A3BP-206ENST00000508809 CACNA2D2Q9NY47 1150 aa9.05□□□□□ -0.96
COL4A3BP-206ENST00000508809 USP36Q9P275 1121 aaKnown RBP9.05□□□□□ -0.96
COL4A3BP-206ENST00000508809 MTMR6Q9Y217 621 aa9.05□□□□□ -0.96
COL4A3BP-206ENST00000508809 SLC27A6Q9Y2P4 619 aa9.05□□□□□ -0.96
COL4A3BP-206ENST00000508809 A0A1B0GTW7 788 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 LRRIQ3A6PVS8 624 aaPredicted RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 KCNJ18B7U540 433 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 ECEL1O95672 775 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 PENKP01210 267 aaPredicted RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 IGLV3-19P01714 112 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 RPN1P04843 607 aaKnown RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 IRF1P10914 325 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 CCDC130P13994 396 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 OXTRP30559 389 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 GNA15P30679 374 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 MAP3K7CLP57077 242 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 GOLGA8FQ08AF8 430 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 GOLGA8DPQ0D2H9 430 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 GRIK2Q13002 908 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 KNOP1Q1ED39 458 aaKnown RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 SGSM1Q2NKQ1 1148 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 ZNF699Q32M78 642 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 SOWAHCQ53LP3 525 aaPredicted RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 NAXDQ8IW45 347 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 NELFCDQ8IXH7 590 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 PNPLA1Q8N8W4 532 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 C12orf29Q8N999 325 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 BAHD1Q8TBE0 780 aaPredicted RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 SLC2A14Q8TDB8 520 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 TOE1Q96GM8 510 aaKnown RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 INTS4Q96HW7 963 aaKnown RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 HNRNPABQ99729 332 aaKnown RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 MKRN2Q9H000 416 aaKnown RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 NACA2Q9H009 215 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 CCDC86Q9H6F5 360 aaKnown RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 MAGEF1Q9HAY2 307 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 PNPLA8Q9NP80 782 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 THAP10Q9P2Z0 257 aaPredicted RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 DKK4Q9UBT3 224 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 LSM7Q9UK45 103 aaKnown RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 PCOLCE2Q9UKZ9 415 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 APOBEC2Q9Y235 224 aaKnown RBP9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 ZNF510Q9Y2H8 683 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 ACTL7BQ9Y614 415 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 RAD54BQ9Y620 910 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 STON1Q9Y6Q2 735 aa9.04□□□□□ -0.96
COL4A3BP-206ENST00000508809 HELZ2Q9BYK8 2649 aaKnown RBP9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 GCN1Q92616 2671 aaKnown RBP9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 SHROOM3Q8TF72 1996 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 PVALEFA0A1B0GWK0 134 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 SPTLC2O15270 562 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 EXOC3O60645 756 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 STC2O76061 302 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 ASS1P00966 412 aaKnown RBP9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 KLKB1P03952 638 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 NCAM1P13591 858 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 RARGP13631 454 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 P4HA1P13674 534 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 ARNTP27540 789 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 IL12RB1P42701 662 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 KIF11P52732 1056 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 NDST1P52848 882 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 MFAP3P55082 362 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 BNC1Q01954 994 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 BIRC3Q13489 604 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 STK38Q15208 465 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 ZACNQ401N2 412 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 FUT11Q495W5 492 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 FYB2Q5VWT5 728 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 CDPF1Q6NVV7 123 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 SHC4Q6S5L8 630 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 CLEC20AQ6ZU45 233 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 TMPRSS7Q7RTY8 843 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 GPRIN1Q7Z2K8 1008 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 RBBP8NLQ8NC74 664 aaPredicted RBP9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 GOLGA5Q8TBA6 731 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 TAF4BQ92750 862 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 ELMO3Q96BJ8 720 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 DHX58Q96C10 678 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 GPR174Q9BXC1 333 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 UPF2Q9HAU5 1272 aaKnown RBP9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 PRDM16Q9HAZ2 1276 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 NMUR1Q9HB89 426 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 PCMTD2Q9NV79 361 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 PCDHGB2Q9Y5G2 931 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 PCDHA5Q9Y5H7 936 aa9.03□□□□□ -0.96
COL4A3BP-206ENST00000508809 A0A1W2PQH9 124 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 IKBKBO14920 756 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 MDM4O15151 490 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 BCAT2O15382 392 aaPredicted RBP9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 CYP26A1O43174 497 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 CUTAO60888 179 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 FAM200BP0CF97 657 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 CASP1P29466 404 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 CHKAP35790 457 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms