RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 RPRD1AQ96P16 312 aaPredicted RBP21.47■■□□□ 1.03
CLDND1-216ENST00000507944 OMDQ99983 421 aa21.47■■□□□ 1.03
CLDND1-216ENST00000507944 PDCL3Q9H2J4 239 aa21.47■■□□□ 1.03
CLDND1-216ENST00000507944 SERGEFQ9UGK8 458 aa21.47■■□□□ 1.03
CLDND1-216ENST00000507944 FRYQ5TBA9 3013 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 M0QYT0 321 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 PES1O00541 588 aaKnown RBP21.46■■□□□ 1.03
CLDND1-216ENST00000507944 RNASEH2AO75792 299 aaKnown RBP21.46■■□□□ 1.03
CLDND1-216ENST00000507944 IGHV4-34P06331 123 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 GRIA4P48058 902 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 KLHDC7AQ5VTJ3 777 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 CXorf57Q6NSI4 855 aaKnown RBP21.46■■□□□ 1.03
CLDND1-216ENST00000507944 ZDHHC17Q8IUH5 632 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 TMEM35BQ8NCS4 154 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 PPP1R9BQ96SB3 815 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 ORAI3Q9BRQ5 295 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 SAMSN1Q9NSI8 373 aaKnown RBP21.46■■□□□ 1.03
CLDND1-216ENST00000507944 KLK13Q9UKR3 277 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 PCOLCE2Q9UKZ9 415 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 VANGL2Q9ULK5 521 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 ANKRD6Q9Y2G4 727 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 MSRB2Q9Y3D2 182 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 SNX11Q9Y5W9 270 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 HS3ST4Q9Y661 456 aa21.46■■□□□ 1.03
CLDND1-216ENST00000507944 TMEM131Q92545 1883 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 CBFA2T3O75081 653 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 PAGE1O75459 146 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 PSMD8P48556 350 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 RNASE9P60153 205 aaKnown RBP21.45■■□□□ 1.02
CLDND1-216ENST00000507944 CENPCQ03188 943 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 KCNJ12Q14500 433 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 NCEH1Q6PIU2 408 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 DBX2Q6ZNG2 339 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 KDF1Q8NAX2 398 aaPredicted RBP21.45■■□□□ 1.02
CLDND1-216ENST00000507944 RRN3Q9NYV6 651 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 ADAMTS1Q9UHI8 967 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 FZD4Q9ULV1 537 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 PCDHGB2Q9Y5G2 931 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 FHOD1Q9Y613 1164 aa21.45■■□□□ 1.02
CLDND1-216ENST00000507944 GOLGA4Q13439 2230 aaKnown RBP21.44■■□□□ 1.02
CLDND1-216ENST00000507944 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.44■■□□□ 1.02
CLDND1-216ENST00000507944 LRRC72A6NJI9 287 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 ADH1BP00325 375 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 FTH1P19P0C7X4 201 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 CYP11B1P15538 503 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 GOT1P17174 413 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 C5AR1P21730 350 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 CDH5P33151 784 aaPredicted RBP21.44■■□□□ 1.02
CLDND1-216ENST00000507944 IRAK1P51617 712 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 ZNF177Q13360 481 aaPredicted RBP21.44■■□□□ 1.02
CLDND1-216ENST00000507944 SUZ12Q15022 739 aaKnown RBP21.44■■□□□ 1.02
CLDND1-216ENST00000507944 CT47A1Q5JQC4 288 aaPredicted RBP21.44■■□□□ 1.02
CLDND1-216ENST00000507944 LRSAM1Q6UWE0 723 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 LAYNQ6UX15 382 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 RAB44Q7Z6P3 723 aaPredicted RBP21.44■■□□□ 1.02
CLDND1-216ENST00000507944 C14orf80Q86SX3 495 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 OR2T34Q8NGX1 318 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 ALG14Q96F25 216 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 NPY6RQ99463 290 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 FEM1AQ9BSK4 669 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 SIK2Q9H0K1 926 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 WDCPQ9H6R7 721 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.44■■□□□ 1.02
CLDND1-216ENST00000507944 ZMIZ1Q9ULJ6 1067 aa21.44■■□□□ 1.02
CLDND1-216ENST00000507944 KNTC1P50748 2209 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 A0A1W2PPC4 97 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 FAM221BA6H8Z2 402 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 TMEM8BA6NDV4 472 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 KCNK3O14649 394 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 IL1BP01584 269 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 VAV1P15498 845 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 GGCXP38435 758 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 GABRB2P47870 512 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 VASPP50552 380 aaPredicted RBP21.43■■□□□ 1.02
CLDND1-216ENST00000507944 RACK1P63244 317 aaKnown RBP21.43■■□□□ 1.02
CLDND1-216ENST00000507944 ELAVL3Q14576 367 aaKnown RBP21.43■■□□□ 1.02
CLDND1-216ENST00000507944 TCP11X2Q5H9J9 407 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 OTUD1Q5VV17 481 aaPredicted RBP21.43■■□□□ 1.02
CLDND1-216ENST00000507944 SND1Q7KZF4 910 aaKnown RBP eCLIP21.43■■□□□ 1.02
CLDND1-216ENST00000507944 ADAT2Q7Z6V5 191 aaKnown RBP21.43■■□□□ 1.02
CLDND1-216ENST00000507944 GLRX5Q86SX6 157 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 ERICH1Q86X53 443 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 AADATQ8N5Z0 425 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 PNPLA1Q8N8W4 532 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 OR52K2Q8NGK3 314 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 RHBDD1Q8TEB9 315 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 FRS2Q8WU20 508 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 C18orf8Q96DM3 657 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 NAA15Q9BXJ9 866 aaKnown RBP21.43■■□□□ 1.02
CLDND1-216ENST00000507944 PIGVQ9NUD9 493 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 STAP1Q9ULZ2 295 aa21.43■■□□□ 1.02
CLDND1-216ENST00000507944 NYNRINQ9P2P1 1898 aaKnown RBP21.43■■□□□ 1.02
CLDND1-216ENST00000507944 FLRT2O43155 660 aa21.42■■□□□ 1.02
CLDND1-216ENST00000507944 PLXNA2O75051 1894 aa21.42■■□□□ 1.02
CLDND1-216ENST00000507944 CLDN11O75508 207 aa21.42■■□□□ 1.02
CLDND1-216ENST00000507944 ADCY5O95622 1261 aa21.42■■□□□ 1.02
CLDND1-216ENST00000507944 UCHL3P15374 230 aa21.42■■□□□ 1.02
CLDND1-216ENST00000507944 TFE3P19532 575 aaPredicted RBP21.42■■□□□ 1.02
CLDND1-216ENST00000507944 EEF1GP26641 437 aaKnown RBP21.42■■□□□ 1.02
CLDND1-216ENST00000507944 CXCR3P49682 368 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms