RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 UBXN2BQ14CS0 331 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 FBXO43Q4G163 708 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 DGKKQ5KSL6 1271 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 ZNF783Q6ZMS7 281 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 ANKS1BQ7Z6G8 1248 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 TFAP2DQ7Z6R9 452 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 ADIPOR2Q86V24 386 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 MAP7D3Q8IWC1 876 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 CCDC117Q8IWD4 279 aaPredicted RBP13.2□□□□□ -0.3
TCOF1-210ENST00000506767 CCDC105Q8IYK2 499 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 KATNAL2Q8IYT4 538 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 SYNPOQ8N3V7 929 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 RTL3Q8N8U3 475 aaKnown RBP13.2□□□□□ -0.3
TCOF1-210ENST00000506767 KCTD6Q8NC69 237 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 WFIKKN2Q8TEU8 576 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 KRT35Q92764 455 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 FAF2Q96CS3 445 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 CSPG4P5Q96PW8 444 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 ZNF670Q9BS34 389 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 KLC2Q9H0B6 622 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 KCND1Q9NSA2 647 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 KLHL11Q9NVR0 708 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 AMFRQ9UKV5 643 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 HCN2Q9UL51 889 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 ILVBLA1L0T0 632 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 CCDC66A2RUB6 948 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 TBC1D3BA6NDS4 549 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 ANTXRLA6NF34 631 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 DCLK1O15075 740 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 TIMM44O43615 452 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 AOC1P19801 751 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 MZF1P28698 734 aaPredicted RBP13.19□□□□□ -0.3
TCOF1-210ENST00000506767 PLA2G5P39877 138 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 CSKP41240 450 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 KIR2DL1P43626 348 aaPredicted RBP13.19□□□□□ -0.3
TCOF1-210ENST00000506767 MARCKSL1P49006 195 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 KRT81Q14533 505 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 DMC1Q14565 340 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 EIF4HQ15056 248 aaKnown RBP13.19□□□□□ -0.3
TCOF1-210ENST00000506767 TAZQ16635 292 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 PLEKHG6Q3KR16 790 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 FUT11Q495W5 492 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 C6orf118Q5T5N4 469 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 PEX26Q7Z412 305 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 APCDD1Q8J025 514 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 AHI1Q8N157 1196 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 UMODL1-AS1Q8N2C9 162 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 TTC17Q96AE7 1141 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 HES6Q96HZ4 224 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 FEM1AQ9BSK4 669 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 MFSD1Q9H3U5 465 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 NOL6Q9H6R4 1146 aaKnown RBP13.19□□□□□ -0.3
TCOF1-210ENST00000506767 LMAN1LQ9HAT1 526 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 DLGAP2Q9P1A6 1054 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 DNAI1Q9UI46 699 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.19□□□□□ -0.3
TCOF1-210ENST00000506767 SIT1Q9Y3P8 196 aa13.19□□□□□ -0.3
TCOF1-210ENST00000506767 A0A0D9SEW6 157 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 LRRD1A4D1F6 860 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 USP27XA6NNY8 438 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 MIF4GDA9UHW6 222 aaKnown RBP13.18□□□□□ -0.3
TCOF1-210ENST00000506767 STK25O00506 426 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 NCAM2O15394 837 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 DDX3YO15523 660 aaKnown RBP13.18□□□□□ -0.3
TCOF1-210ENST00000506767 DAPK3O43293 454 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 PI15O43692 258 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 FTCDO95954 541 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 RHOCP08134 193 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 TNNT1P13805 278 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 HNRNPLP14866 589 aaKnown RBP eCLIP13.18□□□□□ -0.3
TCOF1-210ENST00000506767 AMPD1P23109 780 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 RPS9P46781 194 aaKnown RBP13.18□□□□□ -0.3
TCOF1-210ENST00000506767 CLCN5P51795 746 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 GNA12Q03113 381 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 LRRC32Q14392 662 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 ANKRD20A8PQ5CZ79 823 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 PITRM1Q5JRX3 1037 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 MEI1Q5TIA1 1274 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 RNF219Q5W0B1 726 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-210ENST00000506767 AFMIDQ63HM1 303 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 MBLAC2Q68D91 279 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 RCOR2Q8IZ40 523 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 FLCNQ8NFG4 579 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 TRIM58Q8NG06 486 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 EXD1Q8NHP7 514 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 PCDH19Q8TAB3 1148 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 PBXIP1Q96AQ6 731 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-210ENST00000506767 PSMB7Q99436 277 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 CALN1Q9BXU9 219 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 ACE2Q9BYF1 805 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-210ENST00000506767 MAGEH1Q9H213 219 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 LRRC19Q9H756 370 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 RBM12Q9NTZ6 932 aaKnown RBP13.18□□□□□ -0.3
TCOF1-210ENST00000506767 ETNK2Q9NVF9 386 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 ELOVL2Q9NXB9 296 aa13.18□□□□□ -0.3
TCOF1-210ENST00000506767 TRMT1Q9NXH9 659 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms