RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 ADAMTS1Q9UHI8 967 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 MBD1Q9UIS9 605 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-218ENST00000498136 VPS28Q9UK41 221 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 PTPRZ1P23471 2315 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-218ENST00000498136 DOCK4Q8N1I0 1966 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 NUP205Q92621 2012 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 IGHV1OR15-9A0A0B4J2B8 117 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 DRGXA6NNA5 263 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 AP5Z1O43299 807 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 LRP3O75074 770 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 NDUFS2O75306 463 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 SRPRAP08240 638 aaKnown RBP17.18■□□□□ 0.34
ABCF3-218ENST00000498136 TPM1P09493 284 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 ADRA1BP35368 520 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 STK19P49842 368 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-218ENST00000498136 SULT2A1Q06520 285 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 CAMK2GQ13555 558 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-218ENST00000498136 C5orf22Q49AR2 442 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 PPP1R15BQ5SWA1 713 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 HGSNATQ68CP4 663 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 SPECC1LQ69YQ0 1117 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 ZNF683Q8IZ20 524 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 DEFB119Q8N690 84 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 CCDC185Q8N715 623 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 OR2T3Q8NH03 318 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 TRIM11Q96F44 468 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 CNPY3Q9BT09 278 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 ZYG11BQ9C0D3 744 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 MTG2Q9H4K7 406 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 PARD6AQ9NPB6 346 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 CD93Q9NPY3 652 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 SEMA4GQ9NTN9 838 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 CNOT8Q9UFF9 292 aaKnown RBP17.18■□□□□ 0.34
ABCF3-218ENST00000498136 OR12D3Q9UGF7 316 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 SLC25A13Q9UJS0 675 aa17.18■□□□□ 0.34
ABCF3-218ENST00000498136 GPR179Q6PRD1 2367 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 EP300Q09472 2414 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-218ENST00000498136 TTC34A8MYJ7 566 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 PLEKP08567 350 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-218ENST00000498136 PSMA2P25787 234 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 OR1E1P30953 314 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 MPLP40238 635 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 MAMLD1Q13495 774 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 TRIM14Q14142 442 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 ACCSLQ4AC99 568 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 C6orf118Q5T5N4 469 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 PLEKHA7Q6IQ23 1121 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 RWDD4Q6NW29 188 aaKnown RBP17.17■□□□□ 0.34
ABCF3-218ENST00000498136 TMC6Q7Z403 805 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 CYP2U1Q7Z449 544 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 SLFN11Q7Z7L1 901 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 OR52K2Q8NGK3 314 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 MYO19Q96H55 970 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 MRGPRX3Q96LB0 322 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 FEM1AQ9BSK4 669 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 FBRSQ9HAH7 460 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 PRSS16Q9NQE7 514 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 NYNRINQ9P2P1 1898 aaKnown RBP17.17■□□□□ 0.34
ABCF3-218ENST00000498136 SLCO3A1Q9UIG8 710 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 TBC1D30Q9Y2I9 924 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 PCDHGA5Q9Y5G8 931 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 SCINQ9Y6U3 715 aa17.17■□□□□ 0.34
ABCF3-218ENST00000498136 IGLV3-10A0A075B6K4 115 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 EDDM13A0A1B0GTR0 161 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 RNASEH1O60930 286 aaKnown RBP17.16■□□□□ 0.34
ABCF3-218ENST00000498136 SIN3BO75182 1162 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 DNTTP04053 509 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 MYBL1P10243 752 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 PLK1P53350 603 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 KRT83P78385 493 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 CSRP2Q16527 193 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 TSR1Q2NL82 804 aaKnown RBP17.16■□□□□ 0.34
ABCF3-218ENST00000498136 HNRNPA1L2Q32P51 320 aaKnown RBP17.16■□□□□ 0.34
ABCF3-218ENST00000498136 EFHC2Q5JST6 749 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 SETD3Q86TU7 594 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-218ENST00000498136 DRC7Q8IY82 874 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 C12orf50Q8NA57 414 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-218ENST00000498136 KDM1BQ8NB78 822 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 NTAN1Q96AB6 310 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 OSBPL2Q9H1P3 480 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 SMOC1Q9H4F8 434 aa17.16■□□□□ 0.34
ABCF3-218ENST00000498136 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.16■□□□□ 0.34
ABCF3-218ENST00000498136 BCLAF3A2AJT9 711 aaKnown RBP17.15■□□□□ 0.34
ABCF3-218ENST00000498136 CD6P30203 668 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 TPMTP51580 245 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 OGDHQ02218 1023 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 SF3A2Q15428 464 aaKnown RBP17.15■□□□□ 0.34
ABCF3-218ENST00000498136 AASDHQ4L235 1098 aaPredicted RBP17.15■□□□□ 0.34
ABCF3-218ENST00000498136 LYSMD4Q5XG99 296 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 ZNF776Q68DI1 518 aaPredicted RBP17.15■□□□□ 0.34
ABCF3-218ENST00000498136 PRR23CQ6ZRP0 262 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 METTL3Q86U44 580 aaKnown RBP17.15■□□□□ 0.34
ABCF3-218ENST00000498136 FAM124AQ86V42 546 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 VSTM4Q8IW00 320 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 PIGKQ92643 395 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 TBC1D31Q96DN5 1066 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 ALG14Q96F25 216 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 C2orf49Q9BVC5 232 aaPredicted RBP17.15■□□□□ 0.34
ABCF3-218ENST00000498136 MAGEB5Q9BZ81 275 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 ISCUQ9H1K1 167 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms