RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RNF219Q5W0B1 726 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-227ENST00000498056 CXorf57Q6NSI4 855 aaKnown RBP13.93□□□□□ -0.18
CPNE1-227ENST00000498056 C1orf228Q6PIY5 440 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 ETFBKMTQ8IXQ9 262 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 CCDC33Q8N5R6 958 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 PQLC3Q8N755 202 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 OR52K2Q8NGK3 314 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 UBE2Q2Q8WVN8 375 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 CHFRQ96EP1 664 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 OSBPL9Q96SU4 736 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 UHRF1Q96T88 793 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-227ENST00000498056 HERPUD2Q9BSE4 406 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 CD320Q9NPF0 282 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 TRPV5Q9NQA5 729 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 ZNF212Q9UDV6 495 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 GGA2Q9UJY4 613 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 WASH4PA8MWX3 477 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 ESPNB1AK53 854 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 DFFAO00273 331 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 TRIM24O15164 1050 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 PABPC1P11940 636 aaKnown RBP13.92□□□□□ -0.18
CPNE1-227ENST00000498056 TCP1P17987 556 aaKnown RBP13.92□□□□□ -0.18
CPNE1-227ENST00000498056 IL4RP24394 825 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 HLA-FP30511 346 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 CD70P32970 193 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 PTPN7P35236 360 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 SLC6A11P48066 632 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 AMPD2Q01433 879 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 TAZQ16635 292 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 FUT11Q495W5 492 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 IER5LQ5T953 404 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 RNF43Q68DV7 783 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 SLC9A4Q6AI14 798 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 ASTLQ6HA08 431 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-227ENST00000498056 NPNTQ6UXI9 565 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 BBS12Q6ZW61 710 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 ADAT2Q7Z6V5 191 aaKnown RBP13.92□□□□□ -0.18
CPNE1-227ENST00000498056 SETD3Q86TU7 594 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-227ENST00000498056 PLD5Q8N7P1 536 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 OR7D4Q8NG98 312 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 CAPZA3Q96KX2 299 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 SLC2A11Q9BYW1 496 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 C8orf33Q9H7E9 229 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-227ENST00000498056 ARHGEF3Q9NR81 526 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 DONSONQ9NYP3 566 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 DEC1Q9P2X7 70 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 VPS28Q9UK41 221 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 HEY1Q9Y5J3 304 aa13.92□□□□□ -0.18
CPNE1-227ENST00000498056 NCOR1O75376 2440 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 TJP3O95049 919 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 FGGP02679 453 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 PECAM1P16284 738 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-227ENST00000498056 ZFXP17010 805 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-227ENST00000498056 TGM2P21980 687 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 MZF1P28698 734 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-227ENST00000498056 ACVRL1P37023 503 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 ETFBP38117 255 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 EIF2DP41214 584 aaKnown RBP13.91□□□□□ -0.18
CPNE1-227ENST00000498056 GNA12Q03113 381 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 GBE1Q04446 702 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 ADCY2Q08462 1091 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 POLD3Q15054 466 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-227ENST00000498056 PON2Q15165 354 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 GEN1Q17RS7 908 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 PITRM1Q5JRX3 1037 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 IL31Q6EBC2 164 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 TXNDC11Q6PKC3 985 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 RALGPS2Q86X27 583 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-227ENST00000498056 UBALD2Q8IYN6 164 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 AHI1Q8N157 1196 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 ATPAF2Q8N5M1 289 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 TERB1Q8NA31 727 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 FIBINQ8TAL6 211 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 COG1Q8WTW3 980 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 EXOC4Q96A65 974 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 HMCESQ96FZ2 354 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 MSANTD3Q96H12 275 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 PBKQ96KB5 322 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 PNKPQ96T60 521 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 P2RY13Q9BPV8 354 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 SPON2Q9BUD6 331 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 CIPCQ9C0C6 399 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 ATP13A1Q9HD20 1204 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 SMARCAL1Q9NZC9 954 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 KIAA1522Q9P206 1035 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-227ENST00000498056 TBC1D30Q9Y2I9 924 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 SAR1BQ9Y6B6 198 aa13.91□□□□□ -0.18
CPNE1-227ENST00000498056 A0A0D9SEW6 157 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 ILVBLA1L0T0 632 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 ARHGAP42A6NI28 874 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 RASA4BC9J798 803 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
CPNE1-227ENST00000498056 ZNF185O15231 689 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 RASA4O43374 803 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 KAT7O95251 611 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 APODP05090 189 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 OXCT1P55809 520 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 MESP2Q0VG99 397 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 PAFAH1B3Q15102 231 aaKnown RBP13.9□□□□□ -0.18
CPNE1-227ENST00000498056 LONRF2Q1L5Z9 754 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms