RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 NR4A2P43354 598 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 ME1P48163 572 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 TRAPPC10P48553 1259 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 ADPRHP54922 357 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 MTX1Q13505 466 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 PGM5Q15124 567 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 TWIST1Q15672 202 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 GPR162Q16538 588 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 TUBB8Q3ZCM7 444 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 GALNTL6Q49A17 601 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 MIDNQ504T8 468 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 C10orf76Q5T2E6 689 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 ISM2Q6H9L7 571 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 DGAT2L7PQ6IED9 249 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 ERAP2Q6P179 960 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 LRIG3Q6UXM1 1119 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 PIP4P1Q86T03 277 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 MYCT1Q8N699 235 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 ARFGAP1Q8N6T3 406 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 EXD3Q8N9H8 876 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 SLC44A5Q8NCS7 719 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 TRAPPC12Q8WVT3 735 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 ATP2A3Q93084 1043 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 ZNF48Q96MX3 618 aaPredicted RBP3.2□□□□□ -1.9
RIF1-212ENST00000498041 ARPC5LQ9BPX5 153 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 PDE11AQ9HCR9 933 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 TXNRD2Q9NNW7 524 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 TMLHEQ9NVH6 421 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 AGO2Q9UKV8 859 aaKnown RBP3.2□□□□□ -1.9
RIF1-212ENST00000498041 LZTS1Q9Y250 596 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 TNFSF13BQ9Y275 285 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 HS3ST3B1Q9Y662 390 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 DENND4BO75064 1496 aaPredicted RBP3.2□□□□□ -1.9
RIF1-212ENST00000498041 NCOA2Q15596 1464 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 ARHGEF11O15085 1522 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 ABCC2Q92887 1545 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 ARHGEF12Q9NZN5 1544 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 RAPGEF6Q8TEU7 1601 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 CDC42BPBQ9Y5S2 1711 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 TTC3P53804 2025 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 LY6G6EA0A0G2JKS1 128 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 KIR2DS5A0A0G2JLQ3 304 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 MCIDASD6RGH6 385 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 KIR2DS3K7RE56 304 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 IPO5O00410 1097 aaKnown RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 IKBKBO14920 756 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 HNRNPRO43390 633 aaKnown RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 TLX3O43711 291 aaPredicted RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 TCEA3O75764 348 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 HEXIM1O94992 359 aaKnown RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 NFATC1O95644 943 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 CST5P28325 142 aaPredicted RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 CIITAP33076 1130 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 DCTN1Q14203 1278 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 DLGAP5Q15398 846 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 TIGD6Q17RP2 521 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 KIAA1755Q5JYT7 1200 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 JMJD6Q6NYC1 403 aaPredicted RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 CYB5R4Q7L1T6 521 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 RRAGAQ7L523 313 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 MDGA2Q7Z553 956 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 GALNT15Q8N3T1 639 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 ENDOVQ8N8Q3 282 aaKnown RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 NRACQ8N912 160 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 OR6Y1Q8NGX8 325 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 SLC2A12Q8TD20 617 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 RUBCNQ92622 972 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 CLMNQ96JQ2 1002 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 ADAD1Q96M93 576 aaKnown RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 PIGSQ96S52 555 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 FOXP1Q9H334 677 aaPredicted RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 ABHD16BQ9H3Z7 469 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 TAF1DQ9H5J8 278 aaPredicted RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 SAYSD1Q9NPB0 183 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 POT1Q9NUX5 634 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 SRP68Q9UHB9 627 aaKnown RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 UTS2RQ9UKP6 389 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 LAMP3Q9UQV4 416 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 DTX4Q9Y2E6 619 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 DHX57Q6P158 1386 aaKnown RBP3.19□□□□□ -1.9
RIF1-212ENST00000498041 ABCA8O94911 1581 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 CDC42BPAQ5VT25 1732 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 CLASP1Q7Z460 1538 aa3.19□□□□□ -1.9
RIF1-212ENST00000498041 TSPOAP1O95153 1857 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 MAGI1Q96QZ7 1491 aaPredicted RBP3.18□□□□□ -1.9
RIF1-212ENST00000498041 RAB3GAP2Q9H2M9 1393 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 KCNJ18B7U540 433 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 ZNF814B7Z6K7 855 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 PROB1E7EW31 1015 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 H0Y3Z8 333 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 RHODO00212 210 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 TULP3O75386 442 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 BMP15O95972 392 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 WNT1P04628 370 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 IGKV2-30P06310 120 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 VEGFAP15692 232 aaPredicted RBP3.18□□□□□ -1.9
RIF1-212ENST00000498041 HOXB9P17482 250 aaPredicted RBP3.18□□□□□ -1.9
RIF1-212ENST00000498041 STAT1P42224 750 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 GRK6P43250 576 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 OAZ1P54368 228 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms