RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CBFA2T3O75081 653 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 RNASEH2AO75792 299 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 ADH1BP00325 375 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 SLC8A1P32418 973 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 GALCP54803 685 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 C21orf59P57076 290 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 BPIFB4P59827 614 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 PITX1P78337 314 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 APBA1Q02410 837 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 EIF4EBP2Q13542 120 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 TAF5Q15542 800 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 MAN2A1Q16706 1144 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 SND1Q7KZF4 910 aaKnown RBP eCLIP12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 APCDD1Q8J025 514 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 CCAR2Q8N163 923 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 WDTC1Q8N5D0 677 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 OR2T34Q8NGX1 318 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 ADAMTS14Q8WXS8 1223 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 IGSF8Q969P0 613 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 RPL10LQ96L21 214 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 RPRD1AQ96P16 312 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 PRMT1Q99873 361 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 ACE2Q9BYF1 805 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 NEUROG2Q9H2A3 272 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 PDCL3Q9H2J4 239 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 DACH1Q9UI36 760 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 SLCO3A1Q9UIG8 710 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 FZD4Q9ULV1 537 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 TPX2Q9ULW0 747 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 A0A1W2PPC4 97 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 DAB1O75553 588 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 GRAP2O75791 330 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 IL1BP01584 269 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 IGHV4-34P06331 123 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 PDGFRAP16234 1089 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 GOT1P17174 413 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 C5AR1P21730 350 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 PSMD8P48556 350 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 CCT8P50990 548 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 PLK1P53350 603 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 RACK1P63244 317 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 SLC6A3Q01959 620 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 NME3Q13232 169 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 ZNF177Q13360 481 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 ELAVL3Q14576 367 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 INAVAQ3KP66 663 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 NCEH1Q6PIU2 408 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 DBX2Q6ZNG2 339 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 FAM183BPQ6ZVS7 135 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 DSG4Q86SJ6 1040 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 CIR1Q86X95 450 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 ZDHHC17Q8IUH5 632 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 STK40Q8N2I9 435 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 PNPLA1Q8N8W4 532 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 C1orf131Q8NDD1 294 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 RRN3Q9NYV6 651 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 CHMP5Q9NZZ3 219 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 ADAMTS1Q9UHI8 967 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 SLC25A13Q9UJS0 675 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 SLCO1B1Q9Y6L6 691 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 USP24Q9UPU5 2620 aa12.12□□□□□ -0.47
NUDCD3-211ENST00000497978 M0QYT0 321 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 FOXN3O00409 490 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 VILLO15195 856 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 PCDHGA12O60330 932 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 ERBB2P04626 1255 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 MZF1P28698 734 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 NOS2P35228 1153 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 CLCN1P35523 988 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 CTSKP43235 329 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 GRK6P43250 576 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 STK19P49842 368 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 CCR5P51681 352 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 AUHQ13825 339 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 ACCSLQ4AC99 568 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 FBXL22Q6P050 247 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 OLFML1Q6UWY5 402 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 SLC26A9Q7LBE3 791 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 SLC47A2Q86VL8 602 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 TMEM35BQ8NCS4 154 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 OR14C36Q8NHC7 312 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 PTPRN2Q92932 1015 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 SPAG5Q96R06 1193 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 FAM129BQ96TA1 746 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 TUBGCP2Q9BSJ2 902 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 NDST4Q9H3R1 872 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 CLSTN2Q9H4D0 955 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 SIX2Q9NPC8 291 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 AASDHPPTQ9NRN7 309 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 TMEM51Q9NW97 253 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 SERGEFQ9UGK8 458 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 VANGL2Q9ULK5 521 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 STAP1Q9ULZ2 295 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 PAXBP1Q9Y5B6 917 aa12.11□□□□□ -0.47
NUDCD3-211ENST00000497978 TBC1D3DA0A087WVF3 549 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 TBC1D3IA0A087WXS9 549 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 TBC1D3EA0A087X179 549 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 TBC1D3KA0A087X1G2 549 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms