RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 PDCD7Q8N8D1 485 aaKnown RBP16.79■□□□□ 0.28
HLA-A-208ENST00000496081 TLCD1Q96CP7 247 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 VAT1Q99536 393 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 TCF25Q9BQ70 676 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 NOL6Q9H6R4 1146 aaKnown RBP16.79■□□□□ 0.28
HLA-A-208ENST00000496081 ZNF334Q9HCZ1 680 aaPredicted RBP16.79■□□□□ 0.28
HLA-A-208ENST00000496081 TMEM248Q9NWD8 314 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 UXTQ9UBK9 157 aaPredicted RBP16.79■□□□□ 0.28
HLA-A-208ENST00000496081 CHMP2BQ9UQN3 213 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 NYNRINQ9P2P1 1898 aaKnown RBP16.78■□□□□ 0.28
HLA-A-208ENST00000496081 RGS16O15492 202 aaPredicted RBP16.78■□□□□ 0.28
HLA-A-208ENST00000496081 ZBTB24O43167 697 aaPredicted RBP16.78■□□□□ 0.28
HLA-A-208ENST00000496081 F11P03951 625 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 SSTR1P30872 391 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 CD68P34810 354 aaPredicted RBP16.78■□□□□ 0.28
HLA-A-208ENST00000496081 GRIA1P42261 906 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 MAGEA3P43357 314 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 CDK16Q00536 496 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 TERF2Q15554 542 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 CCDC38Q502W7 563 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 DNAJC21Q5F1R6 531 aaKnown RBP16.78■□□□□ 0.28
HLA-A-208ENST00000496081 ITIH5Q86UX2 942 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 CHSY1Q86X52 802 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 ATP11CQ8NB49 1132 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 MYEOVQ96EZ4 313 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 GORASP1Q9BQQ3 440 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 CCDC77Q9BR77 488 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 EIF2B3Q9NR50 452 aaKnown RBP16.78■□□□□ 0.28
HLA-A-208ENST00000496081 TRHDEQ9UKU6 1024 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 LZTS1Q9Y250 596 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 IRAK3Q9Y616 596 aa16.78■□□□□ 0.28
HLA-A-208ENST00000496081 ACSL4O60488 711 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 JCHAINP01591 159 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 ADH1AP07327 375 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 NR1D1P20393 614 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 TACR2P21452 398 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 DNAJB1P25685 340 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 LMAN1P49257 510 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 PAPOLAP51003 745 aaKnown RBP16.77■□□□□ 0.28
HLA-A-208ENST00000496081 TNFAIP8L3Q5GJ75 292 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 EMC10Q5UCC4 262 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 PALM2Q8IXS6 379 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 PLD4Q96BZ4 506 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 TEKT5Q96M29 485 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 RPRD1AQ96P16 312 aaPredicted RBP16.77■□□□□ 0.28
HLA-A-208ENST00000496081 AGAP3Q96P47 875 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 IL21Q9HBE4 155 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 GKN1Q9NS71 199 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 ZNF212Q9UDV6 495 aa16.77■□□□□ 0.28
HLA-A-208ENST00000496081 LINC01553A4QN01 128 aa16.77■□□□□ 0.27
HLA-A-208ENST00000496081 HIDE1A8MVS5 230 aa16.77■□□□□ 0.27
HLA-A-208ENST00000496081 STC2O76061 302 aa16.77■□□□□ 0.27
HLA-A-208ENST00000496081 HARS2P49590 506 aaKnown RBP16.77■□□□□ 0.27
HLA-A-208ENST00000496081 NDST2P52849 883 aa16.77■□□□□ 0.27
HLA-A-208ENST00000496081 MAGOHP61326 146 aaKnown RBP16.77■□□□□ 0.27
HLA-A-208ENST00000496081 IFI35P80217 286 aaPredicted RBP16.77■□□□□ 0.27
HLA-A-208ENST00000496081 FAM133BQ5BKY9 247 aaKnown RBP16.77■□□□□ 0.27
HLA-A-208ENST00000496081 C3orf62Q6ZUJ4 267 aa16.77■□□□□ 0.27
HLA-A-208ENST00000496081 CNTD1Q8N815 330 aa16.77■□□□□ 0.27
HLA-A-208ENST00000496081 KLF16Q9BXK1 252 aaPredicted RBP16.77■□□□□ 0.27
HLA-A-208ENST00000496081 GBA3Q9H227 469 aa16.77■□□□□ 0.27
HLA-A-208ENST00000496081 XAB2Q9HCS7 855 aaKnown RBP16.77■□□□□ 0.27
HLA-A-208ENST00000496081 ENTPD7Q9NQZ7 604 aa16.77■□□□□ 0.27
HLA-A-208ENST00000496081 RSPH14Q9UHP6 348 aa16.77■□□□□ 0.27
HLA-A-208ENST00000496081 ASB3Q9Y575 518 aa16.77■□□□□ 0.27
HLA-A-208ENST00000496081 OBSL1O75147 1896 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 MATN3O15232 486 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 CSPG5O95196 566 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 AGTP01019 485 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 KLKB1P03952 638 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 IVLP07476 585 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 CCNB1P14635 433 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 TSHRP16473 764 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 SLC6A4P31645 630 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 PHBP35232 272 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 SARNPP82979 210 aaKnown RBP16.76■□□□□ 0.27
HLA-A-208ENST00000496081 C5orf22Q49AR2 442 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 ITPRIPL1Q6GPH6 555 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 KDM7AQ6ZMT4 941 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 SPRED2Q7Z698 418 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 CIR1Q86X95 450 aaPredicted RBP16.76■□□□□ 0.27
HLA-A-208ENST00000496081 LRRC49Q8IUZ0 686 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 DENND1CQ8IV53 801 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 MRPL43Q8N983 215 aaKnown RBP16.76■□□□□ 0.27
HLA-A-208ENST00000496081 KREMEN2Q8NCW0 462 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 SPPL3Q8TCT6 385 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 POF1BQ8WVV4 589 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 SIGLEC10Q96LC7 697 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 IL12RB2Q99665 862 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 LBHD1Q9BQE6 289 aaPredicted RBP16.76■□□□□ 0.27
HLA-A-208ENST00000496081 C17orf80Q9BSJ5 609 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 EMILIN2Q9BXX0 1053 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 MTIF3Q9H2K0 278 aaKnown RBP16.76■□□□□ 0.27
HLA-A-208ENST00000496081 DONSONQ9NYP3 566 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 CTNNAL1Q9UBT7 734 aa16.76■□□□□ 0.27
HLA-A-208ENST00000496081 EXOC1LA0A1B0GW35 172 aa16.75■□□□□ 0.27
HLA-A-208ENST00000496081 C2orf71A6NGG8 1288 aa16.75■□□□□ 0.27
HLA-A-208ENST00000496081 F5H5T6 163 aa16.75■□□□□ 0.27
HLA-A-208ENST00000496081 LRG1P02750 347 aa16.75■□□□□ 0.27
HLA-A-208ENST00000496081 C8AP07357 584 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms