RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ELAVL3Q14576 367 aaKnown RBP18.14■□□□□ 0.49
TMEM53-209ENST00000495630 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.14■□□□□ 0.49
TMEM53-209ENST00000495630 BEND5Q7L4P6 421 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 KANSL1Q7Z3B3 1105 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 SPATS2Q86XZ4 545 aaKnown RBP18.14■□□□□ 0.49
TMEM53-209ENST00000495630 SMYD4Q8IYR2 804 aaPredicted RBP18.14■□□□□ 0.49
TMEM53-209ENST00000495630 APCDD1Q8J025 514 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 DQX1Q8TE96 717 aaKnown RBP18.14■□□□□ 0.49
TMEM53-209ENST00000495630 CLEC4CQ8WTT0 213 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 CCDC34Q96HJ3 373 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 RPL10LQ96L21 214 aaKnown RBP18.14■□□□□ 0.49
TMEM53-209ENST00000495630 TSG101Q99816 390 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 ZSWIM1Q9BR11 485 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 MIS12Q9H081 205 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 ARHGAP20Q9P2F6 1191 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 ARMCX3Q9UH62 379 aaPredicted RBP18.14■□□□□ 0.49
TMEM53-209ENST00000495630 DMTF1Q9Y222 760 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 PCDHB4Q9Y5E5 795 aa18.14■□□□□ 0.49
TMEM53-209ENST00000495630 A0A1W2PQ27 194 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 A0A1W2PQ64 194 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 M0QYV0 167 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 RNF225M0QZC1 329 aaPredicted RBP18.13■□□□□ 0.49
TMEM53-209ENST00000495630 PMM2O15305 246 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 SLC7A4O43246 635 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 SART1O43290 800 aaKnown RBP18.13■□□□□ 0.49
TMEM53-209ENST00000495630 ZIC2O95409 532 aaPredicted RBP18.13■□□□□ 0.49
TMEM53-209ENST00000495630 GLDCP23378 1020 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 ACP1P24666 158 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 MZF1P28698 734 aaPredicted RBP18.13■□□□□ 0.49
TMEM53-209ENST00000495630 ACTN2P35609 894 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 PRCPP42785 496 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 SULT2A1Q06520 285 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 ANKRD40Q6AI12 368 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 GPR155Q7Z3F1 870 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 LGI2Q8N0V4 545 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 SLC35C1Q96A29 364 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 FAM131CQ96AQ9 280 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 FCRL3Q96P31 734 aaPredicted RBP18.13■□□□□ 0.49
TMEM53-209ENST00000495630 CLCA2Q9UQC9 943 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 NAALADL1Q9UQQ1 740 aa18.13■□□□□ 0.49
TMEM53-209ENST00000495630 FLNBO75369 2602 aaKnown RBP18.13■□□□□ 0.49
TMEM53-209ENST00000495630 SHROOM3Q8TF72 1996 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 TEX51A0A1B0GUA7 166 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 CAPN9O14815 690 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 DRD3P35462 400 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 RPL34P49207 117 aaKnown RBP18.12■□□□□ 0.49
TMEM53-209ENST00000495630 PLK1P53350 603 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 NUCB2P80303 420 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 STAT4Q14765 748 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 COBLL1Q53SF7 1204 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 DSG4Q86SJ6 1040 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 DCBLD1Q8N8Z6 715 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 NT5C1BQ96P26 610 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 SPAG5Q96R06 1193 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 TRIM62Q9BVG3 475 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 RMND1Q9NWS8 449 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 TJP2Q9UDY2 1190 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 CYTH4Q9UIA0 394 aa18.12■□□□□ 0.49
TMEM53-209ENST00000495630 BRINP1O60477 761 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 MOCS2O96007 188 aaPredicted RBP18.11■□□□□ 0.49
TMEM53-209ENST00000495630 APOEP02649 317 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 BRD2P25440 801 aaKnown RBP18.11■□□□□ 0.49
TMEM53-209ENST00000495630 ACADSBP45954 432 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 VASPP50552 380 aaPredicted RBP18.11■□□□□ 0.49
TMEM53-209ENST00000495630 OXCT1P55809 520 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 PPP2CBP62714 309 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 PPP2CAP67775 309 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 INSM1Q01101 510 aaPredicted RBP18.11■□□□□ 0.49
TMEM53-209ENST00000495630 ZNF211Q13398 564 aaPredicted RBP18.11■□□□□ 0.49
TMEM53-209ENST00000495630 PROX2Q3B8N5 592 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 FAM46CQ5VWP2 391 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 FRS2Q8WU20 508 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 FAM149B1Q96BN6 582 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 BTN2A3PQ96KV6 586 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 PPP1R9BQ96SB3 815 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 METTL14Q9HCE5 456 aaKnown RBP18.11■□□□□ 0.49
TMEM53-209ENST00000495630 SLC12A6Q9UHW9 1150 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 XPO7Q9UIA9 1087 aaKnown RBP18.11■□□□□ 0.49
TMEM53-209ENST00000495630 PLXNA2O75051 1894 aa18.11■□□□□ 0.49
TMEM53-209ENST00000495630 SETXQ7Z333 2677 aaKnown RBP18.1■□□□□ 0.49
TMEM53-209ENST00000495630 CAPN8A6NHC0 703 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 PRAMEF26H0Y7S4 382 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 PLRG1O43660 514 aaKnown RBP18.1■□□□□ 0.49
TMEM53-209ENST00000495630 TACR2P21452 398 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 GPD2P43304 727 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 FMO5P49326 533 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 STK19P49842 368 aaPredicted RBP18.1■□□□□ 0.49
TMEM53-209ENST00000495630 LRRC63Q05C16 580 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 TBC1D25Q3MII6 688 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 ZNF658Q5TYW1 1059 aaPredicted RBP18.1■□□□□ 0.49
TMEM53-209ENST00000495630 SYPL2Q5VXT5 272 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 RAP1GAP2Q684P5 730 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 ZNF605Q86T29 641 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 TAC4Q86UU9 113 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 TRIM69Q86WT6 500 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 STK32AQ8WU08 396 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 COL26A1Q96A83 441 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 SCAND2PQ9GZW5 306 aaPredicted RBP18.1■□□□□ 0.49
TMEM53-209ENST00000495630 GOLPH3LQ9H4A5 285 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms