RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SLC6A17Q9H1V8 727 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 TMEM245Q9H330 911 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 PRDM16Q9HAZ2 1276 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 ABHD10Q9NUJ1 306 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 SLC25A13Q9UJS0 675 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 MYO18AQ92614 2054 aaKnown RBP16.39■□□□□ 0.21
LIME1-209ENST00000494776 IGLV3-10A0A075B6K4 115 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 TMEM191CA6NGB0 347 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 AKR1B15C9JRZ8 316 aaPredicted RBP16.38■□□□□ 0.21
LIME1-209ENST00000494776 AKR1B10O60218 316 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 MFAP3LO75121 409 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 ZNF217O75362 1048 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 ACADMP11310 421 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 GFPT1Q06210 699 aaPredicted RBP16.38■□□□□ 0.21
LIME1-209ENST00000494776 SETD3Q86TU7 594 aaPredicted RBP16.38■□□□□ 0.21
LIME1-209ENST00000494776 TMPRSS6Q8IU80 811 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 PRCCQ92733 491 aaPredicted RBP16.38■□□□□ 0.21
LIME1-209ENST00000494776 SIPA1Q96FS4 1042 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 RPL10LQ96L21 214 aaKnown RBP16.38■□□□□ 0.21
LIME1-209ENST00000494776 FEM1AQ9BSK4 669 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 ANP32EQ9BTT0 268 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 THAP2Q9H0W7 228 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 CD248Q9HCU0 757 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 PPARGC1AQ9UBK2 798 aaKnown RBP16.38■□□□□ 0.21
LIME1-209ENST00000494776 TBC1D30Q9Y2I9 924 aa16.38■□□□□ 0.21
LIME1-209ENST00000494776 AP5Z1O43299 807 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 RETP07949 1114 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 P2RY2P41231 377 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 PLK1P53350 603 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 AIF1P55008 147 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 KRT83P78385 493 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 NRG1Q02297 640 aaPredicted RBP16.37■□□□□ 0.21
LIME1-209ENST00000494776 CAMK2GQ13555 558 aaPredicted RBP16.37■□□□□ 0.21
LIME1-209ENST00000494776 PLK5Q496M5 336 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 CACUL1Q86Y37 369 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 DCLK2Q8N568 766 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 KDM1BQ8NB78 822 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 OR52K2Q8NGK3 314 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 OR2T3Q8NH03 318 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 FNIP1Q8TF40 1166 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 TBC1D31Q96DN5 1066 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 MKRN2Q9H000 416 aaKnown RBP16.37■□□□□ 0.21
LIME1-209ENST00000494776 FZD10Q9ULW2 581 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 CYP8B1Q9UNU6 501 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 USP34Q70CQ2 3546 aa16.37■□□□□ 0.21
LIME1-209ENST00000494776 SSU72P8A0A1W2PR75 194 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 TTC34A8MYJ7 566 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 FAM72CH0Y354 149 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 CREB3O43889 395 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 PRPSAP2O60256 369 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 LRIG2O94898 1065 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 BCKDHBP21953 392 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 STK19P49842 368 aaPredicted RBP16.36■□□□□ 0.21
LIME1-209ENST00000494776 GALCP54803 685 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 SCAPQ12770 1279 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 SLC18A3Q16572 532 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 MAP7D1Q3KQU3 841 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 ACCSLQ4AC99 568 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 FAM72AQ5TYM5 149 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 FAM72DQ6L9T8 149 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 SLC36A4Q6YBV0 504 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 LPCAT2Q7L5N7 544 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 FAM72BQ86X60 149 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 GAS2L3Q86XJ1 694 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 PYROXD2Q8N2H3 581 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 FRMD1Q8N878 549 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 ZC3H10Q96K80 434 aaKnown RBP16.36■□□□□ 0.21
LIME1-209ENST00000494776 MRGPRX3Q96LB0 322 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 CCDC42Q96M95 316 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 EPAS1Q99814 870 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 NCAPGQ9BPX3 1015 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 SPON2Q9BUD6 331 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 C2orf49Q9BVC5 232 aaPredicted RBP16.36■□□□□ 0.21
LIME1-209ENST00000494776 NUP85Q9BW27 656 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 MAGEB5Q9BZ81 275 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 TRIM7Q9C029 511 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 DUSP15Q9H1R2 295 aaPredicted RBP16.36■□□□□ 0.21
LIME1-209ENST00000494776 FBRSQ9HAH7 460 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 PRSS16Q9NQE7 514 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 PCSK1NQ9UHG2 260 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 SLCO3A1Q9UIG8 710 aa16.36■□□□□ 0.21
LIME1-209ENST00000494776 EDDM13A0A1B0GTR0 161 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 ILVBLA1L0T0 632 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 RNASEH1O60930 286 aaKnown RBP16.35■□□□□ 0.21
LIME1-209ENST00000494776 NDUFS2O75306 463 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 RHOQP17081 205 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 L1CAMP32004 1257 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 DHPSP49366 369 aaPredicted RBP16.35■□□□□ 0.21
LIME1-209ENST00000494776 ZNF75DP51815 510 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 COPAP53621 1224 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 RPL6Q02878 288 aaKnown RBP16.35■□□□□ 0.21
LIME1-209ENST00000494776 MAPK8IP2Q13387 824 aaPredicted RBP16.35■□□□□ 0.21
LIME1-209ENST00000494776 ARID5BQ14865 1188 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 HNRNPA1L2Q32P51 320 aaKnown RBP16.35■□□□□ 0.21
LIME1-209ENST00000494776 ZNF783Q6ZMS7 281 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 CTNNBL1Q8WYA6 563 aaPredicted RBP16.35■□□□□ 0.21
LIME1-209ENST00000494776 ALG14Q96F25 216 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 MYO19Q96H55 970 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 LOXL4Q96JB6 756 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 CHP1Q99653 195 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms