RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 HLA-CQ95604 372 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 HDAC11Q96DB2 347 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 P2RY11Q96G91 374 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 CCDC114Q96M63 670 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 BRD8Q9H0E9 1235 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 LINC00597Q9H2U6 94 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 DUS2Q9NX74 493 aaKnown RBP11.7□□□□□ -0.54
MCF2L-231ENST00000494043 EPS15L1Q9UBC2 864 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 ZNF148Q9UQR1 794 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 TBC1D30Q9Y2I9 924 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 XIRP2A4UGR9 3374 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 C5orf42Q9H799 3197 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 DOCK4Q8N1I0 1966 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 DOCK8Q8NF50 2099 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 BCLAF3A2AJT9 711 aaKnown RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 CFAP69A5D8W1 941 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 FAM187AA6NFU0 413 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 ARHGAP42A6NI28 874 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 RASA4BC9J798 803 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 DFFAO00273 331 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 TTI1O43156 1089 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 RASA4O43374 803 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 RAMP2O60895 175 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 ZNF189O75820 626 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 GAS8O95995 478 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 PENKP01210 267 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 RHOCP08134 193 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 HOXD9P28356 352 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 GARSP41250 739 aaKnown RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 PTGIRP43119 386 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 PAPOLAP51003 745 aaKnown RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 YBEYP58557 167 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 MRPS25P82663 173 aaKnown RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 PPIDQ08752 370 aaKnown RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 FCHO2Q0JRZ9 810 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 ZNF177Q13360 481 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 EML3Q32P44 896 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 PARP15Q460N3 678 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 GLE1Q53GS7 698 aaKnown RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 CXorf57Q6NSI4 855 aaKnown RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 CCDC70Q6NSX1 233 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 VITQ6UXI7 678 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 ZNF783Q6ZMS7 281 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 MTSS1LQ765P7 747 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 B4GALNT4Q76KP1 1039 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 MAATS1Q7Z4T9 603 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 TMEM25Q86YD3 366 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 JAMLQ86YT9 394 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 LRRC49Q8IUZ0 686 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 MFSD6LQ8IWD5 586 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 CARNMT1Q8N4J0 409 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 ATPAF2Q8N5M1 289 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 ALLCQ8N6M5 410 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 MYRIPQ8NFW9 859 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 IRF7Q92985 503 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 BHMTQ93088 406 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 ELSPBP1Q96BH3 223 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 ASIC4Q96FT7 647 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 HMCESQ96FZ2 354 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 LGMNQ99538 433 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 TMEM121Q9BTD3 319 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 LRRC1Q9BTT6 524 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 SLC39A8Q9C0K1 460 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 C10orf88Q9H8K7 445 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 SPHK2Q9NRA0 654 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 THG1LQ9NWX6 298 aaKnown RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 MARK1Q9P0L2 795 aa11.69□□□□□ -0.54
MCF2L-231ENST00000494043 FEZ2Q9UHY8 353 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 KIF26AQ9ULI4 1882 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-231ENST00000494043 ILVBLA1L0T0 632 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 H0Y626 953 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 SGK1O00141 431 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 ECI2O75521 394 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 NFATC1O95644 943 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 CYP17A1P05093 508 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 RHOXF2BP0C7M4 288 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 VAV1P15498 845 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 RBL1P28749 1068 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 GNA12Q03113 381 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 ZNF33AQ06730 810 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 AP1B1Q10567 949 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 CDH18Q13634 790 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 HTR4Q13639 388 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 POLD3Q15054 466 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-231ENST00000494043 PDGFRLQ15198 375 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 DHCR24Q15392 516 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 PPP1R7Q15435 360 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 LY6G5CQ5SRR4 150 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 HEATR6Q6AI08 1181 aaKnown RBP11.68□□□□□ -0.54
MCF2L-231ENST00000494043 TRIM68Q6AZZ1 485 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 PARM1Q6UWI2 310 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 SYDE1Q6ZW31 735 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-231ENST00000494043 GSTA5Q7RTV2 222 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 MFN1Q8IWA4 741 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 ADGRG2Q8IZP9 1017 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 FAM71DQ8N9W8 422 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 CCNYQ8ND76 341 aa11.68□□□□□ -0.54
MCF2L-231ENST00000494043 ST13P5Q8NFI4 369 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-231ENST00000494043 OR52K2Q8NGK3 314 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms