RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 TMC6Q7Z403 805 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 SLFN11Q7Z7L1 901 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 KBTBD6Q86V97 674 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 CNGA4Q8IV77 575 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 APCDD1Q8J025 514 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 CCDC185Q8N715 623 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 OR8K1Q8NGG5 319 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 OR2T3Q8NH03 318 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 MYO19Q96H55 970 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 MRGPRX3Q96LB0 322 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 NCAPGQ9BPX3 1015 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 RAB6CQ9H0N0 254 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 DUSP15Q9H1R2 295 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 PRDM16Q9HAZ2 1276 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 ABHD10Q9NUJ1 306 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 ZNHIT6Q9NWK9 470 aaKnown RBP10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 ARHGAP20Q9P2F6 1191 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 OR12D3Q9UGF7 316 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 ERVW-1Q9UQF0 538 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 PCDHGA5Q9Y5G8 931 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 SNX10Q9Y5X0 201 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 SPAG17Q6Q759 2223 aa10.96□□□□□ -0.66
CDC42SE1-206ENST00000492796 A0A087X0T9 212 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 EDDM13A0A1B0GTR0 161 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 SSU72P8A0A1W2PR75 194 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 TMEM191CA6NGB0 347 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 EIF3CLB5ME19 914 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 DCLK1O15075 740 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 SRGAP2O75044 1071 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 MFAP3LO75121 409 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 CNTN5O94779 1100 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 RHOCP08134 193 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 FAM228BP0C875 321 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 MZF1P28698 734 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 OR1E1P30953 314 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 KRT83P78385 493 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 OGDHQ02218 1023 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 ZBTB16Q05516 673 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 HNRNPA1L2Q32P51 320 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 ARTNQ5T4W7 220 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 ALKBH5Q6P6C2 394 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 KIAA1324Q6UXG2 1013 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 SLC36A4Q6YBV0 504 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 TMPRSS6Q8IU80 811 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 PRCCQ92733 491 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 TBC1D31Q96DN5 1066 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 ALG14Q96F25 216 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 SIPA1Q96FS4 1042 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 EIF3CQ99613 913 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 FEM1AQ9BSK4 669 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 C2orf49Q9BVC5 232 aaPredicted RBP10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 TRIM5Q9C035 493 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 MKRN2Q9H000 416 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 MUC3BQ9H195 1237 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 MPP6Q9NZW5 540 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 ZNF212Q9UDV6 495 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 SLC25A13Q9UJS0 675 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 VPS28Q9UK41 221 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 OR51B4Q9Y5P0 310 aa10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 TNRC6BQ9UPQ9 1833 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-206ENST00000492796 ZFHX2Q9C0A1 2572 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 IGHV1OR15-9A0A0B4J2B8 117 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 ILVBLA1L0T0 632 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 TARSL2A2RTX5 802 aaKnown RBP10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 MAP3K13O43283 966 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 AP5Z1O43299 807 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 FOXD2O60548 495 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 RNF8O76064 485 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 LRIG2O94898 1065 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 IGLV3-19P01714 112 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 ACADMP11310 421 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 RHOQP17081 205 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 BCKDHBP21953 392 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 L1CAMP32004 1257 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 HTR7P34969 479 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 ETFBP38117 255 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 DPP6P42658 865 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 CTSOP43234 321 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 MAPKAPK2P49137 400 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 ACAP1Q15027 740 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 SLC18A3Q16572 532 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 CCDC122Q5T0U0 273 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 SCYL2Q6P3W7 929 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 LPCAT2Q7L5N7 544 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 TFAP2DQ7Z6R9 452 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 DNAAF5Q86Y56 855 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 ZNF366Q8N895 744 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 DCAF4L2Q8NA75 395 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 OR52K2Q8NGK3 314 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 RLN3Q8WXF3 142 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 EPAS1Q99814 870 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 SLC6A17Q9H1V8 727 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 DEF6Q9H4E7 631 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 PRSS16Q9NQE7 514 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 ITM2CQ9NQX7 267 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 TMEM248Q9NWD8 314 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 USP36Q9P275 1121 aaKnown RBP10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 MYO1AQ9UBC5 1043 aa10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 MBD1Q9UIS9 605 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-206ENST00000492796 FZD10Q9ULW2 581 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms