RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 KIF1CO43896 1103 aaKnown RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 EGFP01133 1207 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 NCAM1P13591 858 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 CHN1P15882 459 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 ABCB4P21439 1286 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 CORO1AP31146 461 aaKnown RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 MMP13P45452 471 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 PITX1P78337 314 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 COG7P83436 770 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 ADCY2Q08462 1091 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 CCINQ13939 588 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 TRIP4Q15650 581 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 Q6ZS52 159 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 MAML2Q8IZL2 1156 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 MDM1Q8TC05 714 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 RNF139Q8WU17 664 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 CPA5Q8WXQ8 436 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 ZNF317Q96PQ6 595 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 PCDHB18PQ96TA0 734 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 SELENOSQ9BQE4 189 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 SPHK2Q9NRA0 654 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 OLA1Q9NTK5 396 aaKnown RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 C2orf42Q9NWW7 574 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 MTRF1LQ9UGC7 380 aaKnown RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 AGO1Q9UL18 857 aaKnown RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 TPX2Q9ULW0 747 aaKnown RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 HCN4Q9Y3Q4 1203 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 H0Y858 1186 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 MGRN1O60291 552 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 GRAP2O75791 330 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 AGTP01019 485 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 HOXC13P31276 330 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 RPS9P46781 194 aaKnown RBP9.7□□□□□ -0.86
BRCA1-219ENST00000491747 PLTPP55058 493 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 NOMO3P69849 1222 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 CDR2Q01850 454 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 C6orf118Q5T5N4 469 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 DCAF12L1Q5VU92 463 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 PKN3Q6P5Z2 889 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 OLFML1Q6UWY5 402 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 JAMLQ86YT9 394 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 DENND1CQ8IV53 801 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 RHOT2Q8IXI1 618 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 TMEM35BQ8NCS4 154 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 OLIG1Q8TAK6 271 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 ADAM32Q8TC27 787 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 DQX1Q8TE96 717 aaKnown RBP9.7□□□□□ -0.86
BRCA1-219ENST00000491747 FAM149B1Q96BN6 582 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 OTUB2Q96DC9 234 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 P2RY13Q9BPV8 354 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 NSRP1Q9H0G5 558 aaKnown RBP9.7□□□□□ -0.86
BRCA1-219ENST00000491747 INTS9Q9NV88 658 aaKnown RBP9.7□□□□□ -0.86
BRCA1-219ENST00000491747 CACNA1IQ9P0X4 2223 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 ANKRD62A6NC57 917 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 MIF4GDA9UHW6 222 aaKnown RBP9.7□□□□□ -0.86
BRCA1-219ENST00000491747 TRIM24O15164 1050 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 CYP1A1P04798 512 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-219ENST00000491747 ADH5P11766 374 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 CHRNA3P32297 505 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 GABRB2P47870 512 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 YWHAZP63104 245 aaKnown RBP9.7□□□□□ -0.86
BRCA1-219ENST00000491747 MTAPQ13126 283 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 NR1H3Q13133 447 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 OR6B2Q6IFH4 312 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 TPGS1Q6ZTW0 290 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 UBL4BQ8N7F7 174 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 NAT16Q8N8M0 369 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 FBXO25Q8TCJ0 367 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 CD101Q93033 1021 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 CHRDQ9H2X0 955 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 LSM7Q9UK45 103 aaKnown RBP9.7□□□□□ -0.86
BRCA1-219ENST00000491747 STRIP2Q9ULQ0 834 aa9.7□□□□□ -0.86
BRCA1-219ENST00000491747 TLDC2A0PJX2 215 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 NCAM2O15394 837 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 PHF2O75151 1096 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 IGLV3-27P01718 113 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 SHBGP04278 402 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 TNFAIP3P21580 790 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 NUBP1P53384 320 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 SLC6A3Q01959 620 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 SLMAPQ14BN4 828 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 ANGPT1Q15389 498 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 PPP1R7Q15435 360 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 C1orf228Q6PIY5 440 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 TAOK1Q7L7X3 1001 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 ADAT2Q7Z6V5 191 aaKnown RBP9.69□□□□□ -0.86
BRCA1-219ENST00000491747 PIGWQ7Z7B1 504 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 TAC4Q86UU9 113 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 ZNF677Q86XU0 584 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 XYLT1Q86Y38 959 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 C1orf210Q8IVY1 113 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 ETFBKMTQ8IXQ9 262 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 DEFB106AQ8N104 65 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 PHTF2Q8N3S3 785 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 N4BP2L2Q92802 583 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-219ENST00000491747 PLD4Q96BZ4 506 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 ADAM33Q9BZ11 813 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 EPB41L4BQ9H329 900 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 CCDC134Q9H6E4 229 aa9.69□□□□□ -0.86
BRCA1-219ENST00000491747 POPDC2Q9HBU9 364 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms