RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 AADATQ8N5Z0 425 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 RHBDD1Q8TEB9 315 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 PTPRN2Q92932 1015 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 SLC6A18Q96N87 628 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 FAM129BQ96TA1 746 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 OMDQ99983 421 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 NEUROG2Q9H2A3 272 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 PLCB1Q9NQ66 1216 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 ASNSD1Q9NWL6 643 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 TOR4AQ9NXH8 423 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 APOBEC2Q9Y235 224 aaKnown RBP16.21■□□□□ 0.19
SMPD4-220ENST00000491319 A0A1W2PPC4 97 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 H0Y8X5 98 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 DAB1O75553 588 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 SLC2A3P11169 496 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 SLC8A1P32418 973 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 CLCN1P35523 988 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 CTSKP43235 329 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 CCT8P50990 548 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 IL9RQ01113 521 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 PTK2Q05397 1052 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 NME3Q13232 169 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 KCNJ12Q14500 433 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 PTPN20Q4JDL3 420 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 EFHC1Q5JVL4 640 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 RABGAP1LQ5R372 815 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 TTC39BQ5VTQ0 682 aaPredicted RBP16.2■□□□□ 0.18
SMPD4-220ENST00000491319 FBXL22Q6P050 247 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 C11orf57Q6ZUT1 292 aaPredicted RBP16.2■□□□□ 0.18
SMPD4-220ENST00000491319 SLC47A2Q86VL8 602 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 OR52K2Q8NGK3 314 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 RNF34Q969K3 372 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 IGSF8Q969P0 613 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 RPRD1AQ96P16 312 aaPredicted RBP16.2■□□□□ 0.18
SMPD4-220ENST00000491319 NOX5Q96PH1 765 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 EBF2Q9HAK2 575 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 ADAMTS1Q9UHI8 967 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 SLC12A6Q9UHW9 1150 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 DNAJC12Q9UKB3 198 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 VANGL2Q9ULK5 521 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 FZD4Q9ULV1 537 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 FREM2Q5SZK8 3169 aa16.2■□□□□ 0.18
SMPD4-220ENST00000491319 TDRD6O60522 2096 aaKnown RBP16.2■□□□□ 0.18
SMPD4-220ENST00000491319 ADAMTS20P59510 1910 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 MYLKQ15746 1914 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 ARID1BQ8NFD5 2236 aaPredicted RBP16.19■□□□□ 0.18
SMPD4-220ENST00000491319 ACACAQ13085 2346 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 LRRC72A6NJI9 287 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 ATXN1LP0C7T5 689 aaKnown RBP16.19■□□□□ 0.18
SMPD4-220ENST00000491319 METAP1P53582 386 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 ADPRHP54922 357 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 RACK1P63244 317 aaKnown RBP16.19■□□□□ 0.18
SMPD4-220ENST00000491319 SFSWAPQ12872 951 aaKnown RBP16.19■□□□□ 0.18
SMPD4-220ENST00000491319 SLC12A1Q13621 1099 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 AUHQ13825 339 aaKnown RBP16.19■□□□□ 0.18
SMPD4-220ENST00000491319 ELAVL3Q14576 367 aaKnown RBP16.19■□□□□ 0.18
SMPD4-220ENST00000491319 MAN2A1Q16706 1144 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 TPD52L1Q16890 204 aaPredicted RBP16.19■□□□□ 0.18
SMPD4-220ENST00000491319 HSP90AA4PQ58FG1 418 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 OTUD1Q5VV17 481 aaPredicted RBP16.19■□□□□ 0.18
SMPD4-220ENST00000491319 SLC26A9Q7LBE3 791 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 MLKLQ8NB16 471 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 OR2T34Q8NGX1 318 aa16.19■□□□□ 0.18
SMPD4-220ENST00000491319 ACE2Q9BYF1 805 aaPredicted RBP16.19■□□□□ 0.18
SMPD4-220ENST00000491319 FAM170AA1A519 330 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 GOLGA8CPA6NN73 597 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 C10orf142B7Z368 130 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 FOXN3O00409 490 aaPredicted RBP16.18■□□□□ 0.18
SMPD4-220ENST00000491319 PLK4O00444 970 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 ADH1BP00325 375 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 IL1BP01584 269 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 WNT1P04628 370 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 C5AR1P21730 350 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 DRD3P35462 400 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 KRT9P35527 623 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 NNMTP40261 264 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 C21orf59P57076 290 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 PPP2CBP62714 309 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 PPP2CAP67775 309 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 SLC6A3Q01959 620 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 SULT2A1Q06520 285 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 SUZ12Q15022 739 aaKnown RBP16.18■□□□□ 0.18
SMPD4-220ENST00000491319 DPCR1Q3MIW9 517 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 MIIPQ5JXC2 388 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 SND1Q7KZF4 910 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMPD4-220ENST00000491319 OR14C36Q8NHC7 312 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 FRS2Q8WU20 508 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 ALG14Q96F25 216 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 CDC6Q99741 560 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 SYNCQ9H7C4 482 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 HS3ST4Q9Y661 456 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 ZFYVE26Q68DK2 2539 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 CHD5Q8TDI0 1954 aa16.18■□□□□ 0.18
SMPD4-220ENST00000491319 ANKRD11Q6UB99 2663 aaPredicted RBP16.18■□□□□ 0.18
SMPD4-220ENST00000491319 APC2O95996 2303 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 M0QYT0 321 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 TAF4O00268 1085 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 WNT9AO14904 365 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 VILLO15195 856 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 PCDHGA12O60330 932 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms