RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 RAPGEF4Q8WZA2 1011 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 ARHGEF2Q92974 986 aaKnown RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 GRAMD1AQ96CP6 724 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 PDLIM5Q96HC4 596 aaKnown RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 PPP1R13BQ96KQ4 1090 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 FER1L6-AS2Q96M78 137 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 AK8Q96MA6 479 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 WDR92Q96MX6 357 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 MOGAT1Q96PD6 335 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 PPP1R10Q96QC0 940 aaKnown RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 RAB3IPQ96QF0 476 aaPredicted RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 PIP5K1AQ99755 562 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 LBHD1Q9BQE6 289 aaPredicted RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 NDC1Q9BTX1 674 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 TUBB6Q9BUF5 446 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 MECRQ9BV79 373 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 APOL6Q9BWW8 343 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 SLC46A2Q9BY10 475 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 KCNH6Q9H252 994 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 SMARCAD1Q9H4L7 1026 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 RMI1Q9H9A7 625 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 MRPL44Q9H9J2 332 aaKnown RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 MID1IP1Q9NPA3 183 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 NRIP3Q9NQ35 241 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 LIN7CQ9NUP9 197 aaKnown RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 SPATS2LQ9NUQ6 558 aaKnown RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 SAE1Q9UBE0 346 aaPredicted RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 Q9UFV3 132 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 LIMA1Q9UHB6 759 aaKnown RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 CD207Q9UJ71 328 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 ANAPC5Q9UJX4 755 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 DUSP12Q9UNI6 340 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 LIPT1Q9Y234 373 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 ZBTB1Q9Y2K1 713 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 NR2E1Q9Y466 385 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 CDY1Q9Y6F8 540 aa3.61□□□□□ -1.83
PRPF4-203ENST00000488937 EPN1Q9Y6I3 576 aaPredicted RBP3.61□□□□□ -1.83
PRPF4-203ENST00000488937 SYNJ2BP-COX16A0A087WUM0 186 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 LOC105369274A0A096LPK9 316 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 LOC102723532A0A0G2JNH3 316 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 ARHGAP10A1A4S6 786 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 A4D1N5 150 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 SH2D7A6NKC9 451 aaPredicted RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 A8MV72 311 aaPredicted RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 CDRT15L2A8MXV6 281 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 MYO1GB0I1T2 1018 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 SCAMP1O15126 338 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 TXNL1O43396 289 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 STX6O43752 255 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 PRPSAP2O60256 369 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 EXOC3O60645 756 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 KERAO60938 352 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 HEXIM1O94992 359 aaKnown RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 GGPS1O95749 300 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 CER1O95813 267 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 CHEK2O96017 543 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 HMGCRP04035 888 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 SPARCP09486 303 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 CCDC175P0C221 793 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 MYBL1P10243 752 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 RARGP13631 454 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 MAPK3P27361 379 aaPredicted RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 CD38P28907 300 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 HOXA11P31270 313 aaPredicted RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 ADCY8P40145 1251 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 PNPLA4P41247 253 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 CAPZA2P47755 286 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 PTTG1IPP53801 180 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 POLGP54098 1239 aaPredicted RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 SLC12A3P55017 1021 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 DUSP8Q13202 625 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 CRYMQ14894 314 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 MED22Q15528 200 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 CRY2Q49AN0 593 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 GLIPR1L2Q4G1C9 344 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 PLA1AQ53H76 456 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 KLHL35Q6PF15 583 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 PET117Q6UWS5 81 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 ADGRE4PQ86SQ3 457 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 PRIMA1Q86XR5 153 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 DNAAF5Q86Y56 855 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 TMPRSS6Q8IU80 811 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 TBC1D21Q8IYX1 336 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 OR4N4Q8N0Y3 316 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 C10orf53Q8N6V4 93 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF366Q8N895 744 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 ANKRD44Q8N8A2 993 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 SYT2Q8N9I0 419 aaPredicted RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 FSIP1Q8NA03 581 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 MIGA1Q8NAN2 632 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 IPMKQ8NFU5 416 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 GABPB2Q8TAK5 448 aaPredicted RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 HMGB4Q8WW32 186 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 MR1Q95460 341 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 SCAMP4Q969E2 229 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 TRIM44Q96DX7 344 aaPredicted RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 RBM17Q96I25 401 aaKnown RBP3.6□□□□□ -1.83
PRPF4-203ENST00000488937 GCNAQ96QF7 691 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 FSD1Q9BTV5 496 aa3.6□□□□□ -1.83
PRPF4-203ENST00000488937 PLA2G12BQ9BX93 195 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms