RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 HTR7P34969 479 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 NBL1P41271 181 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 VASPP50552 380 aaPredicted RBP19.18■□□□□ 0.66
PTCD3-217ENST00000488801 DGKEP52429 567 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 NHLH1Q02575 133 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 E2F5Q15329 346 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 SCYL2Q6P3W7 929 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 APCDD1Q8J025 514 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 KDM1BQ8NB78 822 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 RFFLQ8WZ73 363 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 TBC1D31Q96DN5 1066 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 HHIPQ96QV1 700 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 CIPCQ9C0C6 399 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 OSGEPQ9NPF4 335 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 TMEM248Q9NWD8 314 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 ZSCAN32Q9NX65 697 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 CACNA2D2Q9NY47 1150 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 USP18Q9UMW8 372 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 AP4E1Q9UPM8 1137 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 SLC8A2Q9UPR5 921 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 PCDHGA2Q9Y5H1 932 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 STON1Q9Y6Q2 735 aa19.18■□□□□ 0.66
PTCD3-217ENST00000488801 RIF1Q5UIP0 2472 aaKnown RBP19.18■□□□□ 0.66
PTCD3-217ENST00000488801 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.17■□□□□ 0.66
PTCD3-217ENST00000488801 HOXB2P14652 356 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 RHOQP17081 205 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 PRKCHP24723 683 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 MAN1A1P33908 653 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 ZNF177Q13360 481 aaPredicted RBP19.17■□□□□ 0.66
PTCD3-217ENST00000488801 CA9Q16790 459 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 ERMARDQ5T6L9 678 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 RAD9BQ6WBX8 426 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 ZNF783Q6ZMS7 281 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 CCDC117Q8IWD4 279 aaPredicted RBP19.17■□□□□ 0.66
PTCD3-217ENST00000488801 CHPFQ8IZ52 775 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 PSMB7Q99436 277 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 FEM1AQ9BSK4 669 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 CTTNBP2NLQ9P2B4 639 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 LCMT1Q9UIC8 334 aa19.17■□□□□ 0.66
PTCD3-217ENST00000488801 DOCK9Q9BZ29 2069 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 ILVBLA1L0T0 632 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 WASH4PA8MWX3 477 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 WASH3PC4AMC7 463 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 MYO1FO00160 1098 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 PRPSAP2O60256 369 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 SRGAP2O75044 1071 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 PROSCO94903 275 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 NDUFA10O95299 355 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 APBB3O95704 486 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 POLR2EP19388 210 aaKnown RBP19.16■□□□□ 0.66
PTCD3-217ENST00000488801 CYLC1P35663 651 aaPredicted RBP19.16■□□□□ 0.66
PTCD3-217ENST00000488801 MAPKAPK2P49137 400 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 NRLP54845 237 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 HADHBP55084 474 aaKnown RBP19.16■□□□□ 0.66
PTCD3-217ENST00000488801 DPYSL2Q16555 572 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 KIAA1211LQ6NV74 962 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 TFAP2DQ7Z6R9 452 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 WDR5BQ86VZ2 330 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 CPNE8Q86YQ8 564 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 RHOT2Q8IXI1 618 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 SPC24Q8NBT2 197 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 TSTD1Q8NFU3 115 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 SLC35G2Q8TBE7 412 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 CYB5D2Q8WUJ1 264 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 TEKT4Q8WW24 435 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 KCTD15Q96SI1 283 aaPredicted RBP19.16■□□□□ 0.66
PTCD3-217ENST00000488801 NDFIP2Q9NV92 336 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 GPATCH2LQ9NWQ4 482 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 PCSK1NQ9UHG2 260 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 REXO2Q9Y3B8 237 aaKnown RBP19.16■□□□□ 0.66
PTCD3-217ENST00000488801 EPN1Q9Y6I3 576 aaPredicted RBP19.16■□□□□ 0.66
PTCD3-217ENST00000488801 GON4LQ3T8J9 2241 aa19.16■□□□□ 0.66
PTCD3-217ENST00000488801 PROB1E7EW31 1015 aa19.15■□□□□ 0.66
PTCD3-217ENST00000488801 MOCS3O95396 460 aa19.15■□□□□ 0.66
PTCD3-217ENST00000488801 ATP5BP06576 529 aaKnown RBP19.15■□□□□ 0.66
PTCD3-217ENST00000488801 SRPRAP08240 638 aaKnown RBP19.15■□□□□ 0.66
PTCD3-217ENST00000488801 CTSOP43234 321 aaPredicted RBP19.15■□□□□ 0.66
PTCD3-217ENST00000488801 C6orf118Q5T5N4 469 aa19.15■□□□□ 0.66
PTCD3-217ENST00000488801 TXNRD3NBQ6F5E7 133 aa19.15■□□□□ 0.66
PTCD3-217ENST00000488801 LONP2Q86WA8 852 aa19.15■□□□□ 0.66
PTCD3-217ENST00000488801 RTL3Q8N8U3 475 aaKnown RBP19.15■□□□□ 0.66
PTCD3-217ENST00000488801 MDGA1Q8NFP4 955 aa19.15■□□□□ 0.66
PTCD3-217ENST00000488801 FAM71BQ8TC56 605 aa19.15■□□□□ 0.66
PTCD3-217ENST00000488801 EPAS1Q99814 870 aa19.15■□□□□ 0.66
PTCD3-217ENST00000488801 NOL6Q9H6R4 1146 aaKnown RBP19.15■□□□□ 0.66
PTCD3-217ENST00000488801 GRPEL1Q9HAV7 217 aa19.15■□□□□ 0.66
PTCD3-217ENST00000488801 ERVW-1Q9UQF0 538 aa19.15■□□□□ 0.66
PTCD3-217ENST00000488801 A0A0D9SEW6 157 aa19.14■□□□□ 0.65
PTCD3-217ENST00000488801 CXorf51AA0A1B0GTR3 108 aa19.14■□□□□ 0.65
PTCD3-217ENST00000488801 RHOCP08134 193 aa19.14■□□□□ 0.65
PTCD3-217ENST00000488801 OR1E1P30953 314 aa19.14■□□□□ 0.65
PTCD3-217ENST00000488801 WASP42768 502 aa19.14■□□□□ 0.65
PTCD3-217ENST00000488801 FNTBP49356 437 aa19.14■□□□□ 0.65
PTCD3-217ENST00000488801 ZNF135P52742 658 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-217ENST00000488801 SULT2A1Q06520 285 aa19.14■□□□□ 0.65
PTCD3-217ENST00000488801 CAMK2GQ13555 558 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-217ENST00000488801 RNF219Q5W0B1 726 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-217ENST00000488801 DCAF4L2Q8NA75 395 aa19.14■□□□□ 0.65
PTCD3-217ENST00000488801 BAG1Q99933 345 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-217ENST00000488801 FAM86C1Q9NVL1 165 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms