RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 NRG1Q02297 640 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 MANEALQ5VSG8 457 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 PLEKHA7Q6IQ23 1121 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 DNAJC24Q6P3W2 148 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 SLC36A4Q6YBV0 504 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 PRR23CQ6ZRP0 262 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 LPCAT2Q7L5N7 544 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 FAM172AQ8WUF8 416 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 RMDN1Q96DB5 314 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 MCEEQ96PE7 176 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 OSBPL2Q9H1P3 480 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 SMOC1Q9H4F8 434 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 ITIH6Q6UXX5 1313 aa16.41■□□□□ 0.22
CTDSP1-209ENST00000488627 TTC34A8MYJ7 566 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 FAM72CH0Y354 149 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 FTLP02792 175 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 DHPSP49366 369 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 STK19P49842 368 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 TPMTP51580 245 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 ST8SIA6P61647 398 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 ZBED6P86452 979 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 CREB5Q02930 508 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 LMNB2Q03252 620 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 SULT2A1Q06520 285 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 SF3A2Q15428 464 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 C9orf64Q5T6V5 341 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 FAM72AQ5TYM5 149 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 FAM72DQ6L9T8 149 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 PPP1R2P3Q6NXS1 205 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 LRRC31Q6UY01 552 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 FAM72BQ86X60 149 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 SLC41A1Q8IVJ1 513 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 CCDC185Q8N715 623 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 CPLX3Q8WVH0 158 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 PRCCQ92733 491 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 IQCDQ96DY2 449 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 RPL10LQ96L21 214 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 PSMB7Q99436 277 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 VPS45Q9NRW7 570 aa16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 WSB2Q9NYS7 404 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-209ENST00000488627 A0A0D9SEW6 157 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 CCP110O43303 1012 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 SRGAP2O75044 1071 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 SIN3BO75182 1162 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 RTN2O75298 545 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 CD6P30203 668 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 RPS14P62263 151 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 RPL6Q02878 288 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 RNF219Q5W0B1 726 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 SETD3Q86TU7 594 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 DEFB119Q8N690 84 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 FRS2Q8WU20 508 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 NTAN1Q96AB6 310 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 ZNF419Q96HQ0 510 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 CNPY3Q9BT09 278 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 ISCUQ9H1K1 167 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 RSPH9Q9H1X1 276 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 FBRSQ9HAH7 460 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 RXFP3Q9NSD7 469 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 TMEM74BQ9NUR3 256 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 PARVAQ9NVD7 372 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 DLL3Q9NYJ7 618 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 PPARGC1AQ9UBK2 798 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 OR12D3Q9UGF7 316 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 NEU3Q9UQ49 428 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 LUC7L2Q9Y383 392 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 BZW2Q9Y6E2 419 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 DMXL1Q9Y485 3027 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 DCHS1Q96JQ0 3298 aa16.39■□□□□ 0.21
CTDSP1-209ENST00000488627 CEP250Q9BV73 2442 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 TARSL2A2RTX5 802 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 PRR5-ARHGAP8B1AHC4 643 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 AP5Z1O43299 807 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 ATMINO43313 823 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 GDF9O60383 454 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 PLEKP08567 350 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 ITPKAP23677 461 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 ARHGAP8P85298 464 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 ZBTB16Q05516 673 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 SCAPQ12770 1279 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 ARL13BQ3SXY8 428 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 TCEAL6Q6IPX3 200 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 ARMCX6Q7L4S7 300 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 CYP2U1Q7Z449 544 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 TFAP2DQ7Z6R9 452 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 NLRP14Q86W24 1093 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 ARFGAP1Q8N6T3 406 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 RNF214Q8ND24 703 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 PTPRN2Q92932 1015 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 TCEAL3Q969E4 200 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 TOE1Q96GM8 510 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 PPP1R9BQ96SB3 815 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 FAM129BQ96TA1 746 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 ZYG11BQ9C0D3 744 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 ADAMTS1Q9UHI8 967 aa16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 MUC22E2RYF6 1773 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-209ENST00000488627 GON4LQ3T8J9 2241 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 EDDM13A0A1B0GTR0 161 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 TMEM191CA6NGB0 347 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms