RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 NOCTQ9UK39 431 aaKnown RBP23.8■■□□□ 1.4
CUL4A-209ENST00000488558 VANGL2Q9ULK5 521 aa23.8■■□□□ 1.4
CUL4A-209ENST00000488558 TPRP12270 2363 aaKnown RBP23.8■■□□□ 1.4
CUL4A-209ENST00000488558 CHD8Q9HCK8 2581 aa23.8■■□□□ 1.4
CUL4A-209ENST00000488558 NUMA1Q14980 2115 aa23.8■■□□□ 1.4
CUL4A-209ENST00000488558 MBD3O95983 291 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 CD59P13987 128 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 JAM2P57087 298 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 MYL5Q02045 173 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 ELAVL3Q14576 367 aaKnown RBP23.79■■□□□ 1.4
CUL4A-209ENST00000488558 IL27RAQ6UWB1 636 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 ANKRD20A12PQ8NF67 263 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 OR2I1PQ8NGU4 316 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 ALG14Q96F25 216 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 TKTL2Q9H0I9 626 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 WDCPQ9H6R7 721 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 ADAMTS1Q9UHI8 967 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 FZD4Q9ULV1 537 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 TBC1D30Q9Y2I9 924 aa23.79■■□□□ 1.4
CUL4A-209ENST00000488558 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.78■■□□□ 1.4
CUL4A-209ENST00000488558 MMEP08473 750 aa23.78■■□□□ 1.4
CUL4A-209ENST00000488558 MZF1P28698 734 aaPredicted RBP23.78■■□□□ 1.4
CUL4A-209ENST00000488558 AFF3P51826 1226 aaKnown RBP23.78■■□□□ 1.4
CUL4A-209ENST00000488558 CDH4P55283 916 aa23.78■■□□□ 1.4
CUL4A-209ENST00000488558 RNASE9P60153 205 aaKnown RBP23.78■■□□□ 1.4
CUL4A-209ENST00000488558 CDR2Q01850 454 aa23.78■■□□□ 1.4
CUL4A-209ENST00000488558 DEUP1Q05D60 604 aa23.78■■□□□ 1.4
CUL4A-209ENST00000488558 ZNF177Q13360 481 aaPredicted RBP23.78■■□□□ 1.4
CUL4A-209ENST00000488558 BNIPLQ7Z465 357 aa23.78■■□□□ 1.4
CUL4A-209ENST00000488558 BIRC7Q96CA5 298 aa23.78■■□□□ 1.4
CUL4A-209ENST00000488558 FEM1AQ9BSK4 669 aa23.78■■□□□ 1.4
CUL4A-209ENST00000488558 FAM207AQ9NSI2 230 aaPredicted RBP23.78■■□□□ 1.4
CUL4A-209ENST00000488558 FBXL12Q9NXK8 326 aa23.78■■□□□ 1.4
CUL4A-209ENST00000488558 LIMA1Q9UHB6 759 aaKnown RBP23.78■■□□□ 1.4
CUL4A-209ENST00000488558 TMEM59LQ9UK28 342 aa23.78■■□□□ 1.4
CUL4A-209ENST00000488558 SIK3Q9Y2K2 1263 aa23.78■■□□□ 1.4
CUL4A-209ENST00000488558 ADCY5O95622 1261 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 CER1O95813 267 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 ADH1BP00325 375 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 ZNF883P0CG24 379 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 TFE3P19532 575 aaPredicted RBP23.77■■□□□ 1.4
CUL4A-209ENST00000488558 SOX5P35711 763 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 FLT3P36888 993 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 STK19P49842 368 aaPredicted RBP23.77■■□□□ 1.4
CUL4A-209ENST00000488558 KLK7P49862 253 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 IRAK1P51617 712 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 COPB1P53618 953 aaKnown RBP23.77■■□□□ 1.4
CUL4A-209ENST00000488558 POLR2FP61218 127 aaKnown RBP23.77■■□□□ 1.4
CUL4A-209ENST00000488558 NAA35Q5VZE5 725 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 SNX19Q92543 992 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 PTPRN2Q92932 1015 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 RPL10LQ96L21 214 aaKnown RBP23.77■■□□□ 1.4
CUL4A-209ENST00000488558 C1orf74Q96LT6 269 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 FAM129BQ96TA1 746 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 TBCBQ99426 244 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 SLC25A13Q9UJS0 675 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 WASF3Q9UPY6 502 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 OR51B4Q9Y5P0 310 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 EPG5Q9HCE0 2579 aa23.77■■□□□ 1.4
CUL4A-209ENST00000488558 CEP295Q9C0D2 2601 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 I6L893 689 aaPredicted RBP23.76■■□□□ 1.39
CUL4A-209ENST00000488558 MID1O15344 667 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 GFPT2O94808 682 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 CYP1A1P04798 512 aaPredicted RBP23.76■■□□□ 1.39
CUL4A-209ENST00000488558 C5AR1P21730 350 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 CD27P26842 260 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 GRIA4P48058 902 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 TRIM72Q6ZMU5 477 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 C14orf80Q86SX3 495 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 MMAAQ8IVH4 418 aaKnown RBP23.76■■□□□ 1.39
CUL4A-209ENST00000488558 ZNF683Q8IZ20 524 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 FRS2Q8WU20 508 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 SLC20A1Q8WUM9 679 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 SPAG5Q96R06 1193 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 SIK2Q9H0K1 926 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 ANLNQ9NQW6 1124 aa23.76■■□□□ 1.39
CUL4A-209ENST00000488558 LGALS16A8MUM7 142 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 C10orf142B7Z368 130 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 EPHB6O15197 1021 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 ATP9BO43861 1147 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 MMP8P22894 467 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 SLC8A1P32418 973 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 GGCXP38435 758 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 FMO1Q01740 532 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 BNC1Q01954 994 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 TEAD4Q15561 434 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 CCDC183Q5T5S1 534 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 KIAA0895LQ68EN5 471 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 OR52K2Q8NGK3 314 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 GANCQ8TET4 914 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 CPA5Q8WXQ8 436 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 TM9SF3Q9HD45 589 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 SERGEFQ9UGK8 458 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 VPS28Q9UK41 221 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 TPX2Q9ULW0 747 aaKnown RBP23.75■■□□□ 1.39
CUL4A-209ENST00000488558 PCNX2A6NKB5 2137 aa23.75■■□□□ 1.39
CUL4A-209ENST00000488558 DOCK4Q8N1I0 1966 aa23.74■■□□□ 1.39
CUL4A-209ENST00000488558 IGLV3-10A0A075B6K4 115 aa23.74■■□□□ 1.39
CUL4A-209ENST00000488558 A0A1W2PP55 124 aa23.74■■□□□ 1.39
CUL4A-209ENST00000488558 LRRC10BA6NIK2 292 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms