RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 HLA-BQ31612 363 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 ACCSLQ4AC99 568 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 FAM102AQ5T9C2 384 aaPredicted RBP11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 OTUD1Q5VV17 481 aaPredicted RBP11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 SLC26A9Q7LBE3 791 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 PHLDB2Q86SQ0 1253 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 NOP9Q86U38 636 aaKnown RBP11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 ERICH1Q86X53 443 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 TMEM35BQ8NCS4 154 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 OR52K2Q8NGK3 314 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 C1orf216Q8TAB5 229 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 GPT2Q8TD30 523 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 SETD7Q8WTS6 366 aaKnown RBP11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 CPA5Q8WXQ8 436 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 PTPRN2Q92932 1015 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 C18orf8Q96DM3 657 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 FAM129BQ96TA1 746 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 OMDQ99983 421 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 TKTL2Q9H0I9 626 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 NEUROG2Q9H2A3 272 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 SGK2Q9HBY8 427 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 NLRC4Q9NPP4 1024 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 ANLNQ9NQW6 1124 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 TMPRSS4Q9NRS4 437 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 PIGVQ9NUD9 493 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 FNDC3AQ9Y2H6 1198 aaKnown RBP11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 ACACAQ13085 2346 aa11.65□□□□□ -0.54
NIPAL3-207ENST00000488155 AKAP13Q12802 2813 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 ANKRD36A6QL64 1941 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 UPK3BL1B0FP48 263 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 UPK3BL2E5RIL1 263 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 CNTN5O94779 1100 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 GFPT2O94808 682 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 MMEP08473 750 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 NNMTP40261 264 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 MATKP42679 507 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 METAP1P53582 386 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 GALCP54803 685 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 ZNF177Q13360 481 aaPredicted RBP11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 TRIP6Q15654 476 aaKnown RBP11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 KIF19Q2TAC6 998 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 POM121L1PQ3SYA9 428 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 NAA35Q5VZE5 725 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 CXorf57Q6NSI4 855 aaKnown RBP11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 NCEH1Q6PIU2 408 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 ADAT2Q7Z6V5 191 aaKnown RBP11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 NAXDQ8IW45 347 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 CHCHD4Q8N4Q1 142 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 PNPLA1Q8N8W4 532 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 ZNF397Q8NF99 534 aaPredicted RBP11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 TBCBQ99426 244 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 NPY6RQ99463 290 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 NAA15Q9BXJ9 866 aaKnown RBP11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 ZDHHC5Q9C0B5 715 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 WDCPQ9H6R7 721 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 TM9SF3Q9HD45 589 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 TM7SF3Q9NS93 570 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 WASF3Q9UPY6 502 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 SNX11Q9Y5W9 270 aa11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 KMT2BQ9UMN6 2715 aaPredicted RBP11.64□□□□□ -0.55
NIPAL3-207ENST00000488155 ITIH6Q6UXX5 1313 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 TARSL2A2RTX5 802 aaKnown RBP11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 F8VZ95 297 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 I6L893 689 aaPredicted RBP11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 CER1O95813 267 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 IL1BP01584 269 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 ZNF18P17022 549 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 EEF1GP26641 437 aaKnown RBP11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 AFF3P51826 1226 aaKnown RBP11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 POLR2FP61218 127 aaKnown RBP11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 IL9RQ01113 521 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 DEUP1Q05D60 604 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 SLC12A1Q13621 1099 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 KRT31Q15323 416 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 ALFQ53S48 1182 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 PRAMEF14Q5SWL7 426 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 KIAA0895LQ68EN5 471 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 LRSAM1Q6UWE0 723 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 UNQ6494/PRO21346Q6UXR6 183 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 USP30Q70CQ3 517 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 SND1Q7KZF4 910 aaKnown RBP eCLIP11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 XYLT1Q86Y38 959 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 ZDHHC17Q8IUH5 632 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 AADATQ8N5Z0 425 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 OR14C36Q8NHC7 312 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 ENOX1Q8TC92 643 aaKnown RBP11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 SLC20A1Q8WUM9 679 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 FEM1AQ9BSK4 669 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 STK33Q9BYT3 514 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 MUC3BQ9H195 1237 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 PCED1AQ9H1Q7 454 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 EBF2Q9HAK2 575 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 FAM207AQ9NSI2 230 aaPredicted RBP11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 FANCLQ9NW38 375 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 SLC25A13Q9UJS0 675 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 VPS28Q9UK41 221 aa11.63□□□□□ -0.55
NIPAL3-207ENST00000488155 KLK13Q9UKR3 277 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms