RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CFHR1Q03591 330 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 GOLGA8FQ08AF8 430 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 GALNT3Q14435 633 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 ANKRD1Q15327 319 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 EARS2Q5JPH6 523 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 C10orf76Q5T2E6 689 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 LRIG3Q6UXM1 1119 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 ZNF793Q6ZN11 406 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 FAM57BQ71RH2 274 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 MDGA2Q7Z553 956 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 HERC6Q8IVU3 1022 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 SRRM1Q8IYB3 904 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 PAQR4Q8N4S7 273 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 OR52N4Q8NGI2 321 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 BCAS4Q8TDM0 211 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 ATP2A3Q93084 1043 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 UBXN10Q96LJ8 280 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 NPAS1Q99742 590 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 RIC8AQ9NPQ8 531 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 RASSF1Q9NS23 344 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 TMEM184CQ9NVA4 438 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 THAP1Q9NVV9 213 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 FBXO4Q9UKT5 387 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 DNAJC16Q9Y2G8 782 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 CXorf65A6NEN9 183 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 NPIPB13A6NJU9 1138 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 NPIPB5A8MRT5 1133 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 NPIPB4C9JG80 1138 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 ADAM10O14672 748 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 MSI1O43347 362 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 ANP32CO43423 234 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 UGDHO60701 494 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 PKMP14618 531 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 HOXB9P17482 250 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 FBLP22087 321 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 CNTFP26441 200 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 CIITAP33076 1130 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 MMP13P45452 471 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 THOC5Q13769 683 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 CCDC142Q17RM4 750 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 GXYLT1Q4G148 440 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 ZNF626Q68DY1 528 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 CCDC70Q6NSX1 233 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 MTFR2Q6P444 385 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 SLC30A9Q6PML9 568 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 CYP26C1Q6V0L0 522 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 CYB5R4Q7L1T6 521 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 KLBQ86Z14 1044 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 IP6K1Q92551 441 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 USP13Q92995 863 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 SIGLEC11Q96RL6 698 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 HERC2P3Q9BVR0 1158 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 ACAD9Q9H845 621 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 TMEM45AQ9NWC5 275 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 KLQ9UEF7 1012 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 ANAPC4Q9UJX5 808 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 PKP3Q9Y446 797 aa4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 LRRFIP2Q9Y608 721 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-217ENST00000488087 E5RJQ4 531 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 F8W810 466 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 CTSAP10619 480 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 CYP19A1P11511 503 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 CKMT1AP12532 417 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 CYP4B1P13584 511 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 TNNT1P13805 278 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 STAT1P42224 750 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 RPS6KA3P51812 740 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 UBE3AQ05086 875 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 PGM5Q15124 567 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 TRIP6Q15654 476 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 Q4G0T1 1027 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 MORN5Q5VZ52 161 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 MMS22LQ6ZRQ5 1243 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 RTL10Q7L3V2 364 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 RNF144BQ7Z419 303 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 UBE2Q1Q7Z7E8 422 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 ANKRD13BQ86YJ7 626 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 SCN4BQ8IWT1 228 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 EXD3Q8N9H8 876 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 STAMQ92783 540 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 PPP1R10Q96QC0 940 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 UBA5Q9GZZ9 404 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 MAF1Q9H063 256 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 TXNRD2Q9NNW7 524 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 PAPOLBQ9NRJ5 636 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 TRNAU1APQ9NX07 287 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 SAGE1Q9NXZ1 904 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 UTS2RQ9UKP6 389 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 SUFUQ9UMX1 484 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 DTX4Q9Y2E6 619 aa4.24□□□□□ -1.73
ECHDC1-217ENST00000488087 ZNF804BA4D1E1 1349 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 WDR91A4D1P6 747 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 RRN3P2A6NIE6 340 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 SAC3D1A6NKF1 404 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 RHODO00212 210 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 NCAM2O15394 837 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 SH3BP5O60239 455 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 HOXD9P28356 352 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 CHRNA5P30532 468 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 CBWD5Q5RIA9 395 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms