RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 C8orf58Q8NAV2 365 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 NSMCE1Q8WV22 266 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 KCNJ9Q92806 393 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 ATP2A3Q93084 1043 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 RBM17Q96I25 401 aaKnown RBP3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 C5orf34Q96MH7 638 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 ASB2Q96Q27 587 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 FCRL5Q96RD9 977 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 PIGSQ96S52 555 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 ZNF347Q96SE7 839 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 SH2D3AQ9BRG2 576 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 QTRT1Q9BXR0 403 aaKnown RBP3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 PRSS22Q9GZN4 317 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 PRDM16Q9HAZ2 1276 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 SLC22A11Q9NSA0 550 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 TMEM160Q9NX00 188 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 IFT80Q9P2H3 777 aaPredicted RBP3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 KLHL13Q9P2N7 655 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 GJD2Q9UKL4 321 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 CRYL1Q9Y2S2 319 aa3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 SIRT4Q9Y6E7 314 aaPredicted RBP3.2□□□□□ -1.9
R3HDM1-219ENST00000488035 SLC22A23A1A5C7 686 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 VWA3AA6NCI4 1184 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 C3orf70A6NLC5 250 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 C17orf100A8MU93 164 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 TMEM232C9JQI7 657 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 UBE2Q2LH0YL09 131 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 SLC3A2P08195 630 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 CNPP09543 421 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 HOXA7P31268 230 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 ZBTB16Q05516 673 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 EFR3AQ14156 821 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 DLGAP5Q15398 846 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 ARL13AQ5H913 290 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 CEP78Q5JTW2 689 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 MTFR2Q6P444 385 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 SLC2A7Q6PXP3 512 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 ZNF474Q6S9Z5 364 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 DHRS13Q6UX07 377 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 VPS52Q8N1B4 723 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 FSIP1Q8NA03 581 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 ZNF398Q8TD17 642 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 IP6K1Q92551 441 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 MAP4K1Q92918 833 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 USP13Q92995 863 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 MAELQ96JY0 434 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 MARK4Q96L34 752 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 NPAS1Q99742 590 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 REEP2Q9BRK0 252 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 ABHD14AQ9BUJ0 271 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 HTATIP2Q9BUP3 242 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 SPRTNQ9H040 489 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 IL21RQ9HBE5 538 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 RASSF1Q9NS23 344 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 ARL8BQ9NVJ2 186 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 PDP2Q9P2J9 529 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 HDAC6Q9UBN7 1215 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 FBXO4Q9UKT5 387 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 BAG5Q9UL15 447 aa3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 RRP7AQ9Y3A4 280 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-219ENST00000488035 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 TTC34A8MYJ7 566 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 KLK10O43240 276 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 CPA1P15085 419 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 ARSAP15289 507 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 PNPLA4P41247 253 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 UBE3AQ05086 875 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 CHRNDQ07001 517 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 MTA1Q13330 715 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 PGM5Q15124 567 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 RABEP1Q15276 862 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 TRIP6Q15654 476 aaKnown RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 PFKFB3Q16875 520 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 KRTAP27-1Q3LI81 207 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 ANXA2RQ3ZCQ2 193 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 CERKLQ49MI3 558 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 CTXN3Q4LDR2 81 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 ALFQ53S48 1182 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 UBAP2Q5T6F2 1119 aaKnown RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 MAP3K21Q5TCX8 1036 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 RBM44Q6ZP01 1051 aaKnown RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 BBS12Q6ZW61 710 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 SCN4BQ8IWT1 228 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 ESX1Q8N693 406 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 ARL14EPQ8N8R7 260 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 SRFBP1Q8NEF9 429 aaKnown RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 IL17REQ8NFR9 667 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 OSR1Q8TAX0 266 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 FAM110DQ8TAY7 271 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 C2CD4CQ8TF44 421 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 STAMQ92783 540 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 P2RY11Q96G91 374 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 ADAD1Q96M93 576 aaKnown RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 SENP7Q9BQF6 1050 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 PHF7Q9BWX1 381 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 FRMD8Q9BZ67 464 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 CTDSP1Q9GZU7 261 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 ACAD9Q9H845 621 aa3.18□□□□□ -1.9
R3HDM1-219ENST00000488035 TXNRD2Q9NNW7 524 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms