RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 SLCO3A1Q9UIG8 710 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 MYO6Q9UM54 1294 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 DCHS1Q96JQ0 3298 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 MEI4A8MW99 385 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 RNASEH1O60930 286 aaKnown RBP21.03■□□□□ 0.96
HDAC4-209ENST00000487617 CNTN5O94779 1100 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 SERPINC1P01008 464 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 CALB1P05937 261 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 KRT3P12035 628 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 SDC4P31431 198 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 NNMTP40261 264 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 STK19P49842 368 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-209ENST00000487617 TPM4P67936 248 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 ZBTB16Q05516 673 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 ARID5BQ14865 1188 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 CDO1Q16878 200 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 WDR45BQ5MNZ6 344 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 ACBD5Q5T8D3 534 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-209ENST00000487617 SLC23A3Q6PIS1 610 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 RABEPKQ7Z6M1 372 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 ZNF683Q8IZ20 524 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 CADM4Q8NFZ8 388 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 OR52K2Q8NGK3 314 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 JOSD2Q8TAC2 188 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 BAP1Q92560 729 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 HAPLN3Q96S86 360 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 FEM1AQ9BSK4 669 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 SELENOOQ9BVL4 669 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 RSPH9Q9H1X1 276 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-209ENST00000487617 NUP205Q92621 2012 aa21.03■□□□□ 0.96
HDAC4-209ENST00000487617 A0A1B0GTH6 734 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 EDDM13A0A1B0GTR0 161 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 A0A1W2PQC6 194 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 MED19A0JLT2 244 aaPredicted RBP21.02■□□□□ 0.96
HDAC4-209ENST00000487617 TARSL2A2RTX5 802 aaKnown RBP21.02■□□□□ 0.96
HDAC4-209ENST00000487617 C2CD4BA6NLJ0 364 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 C4orf47A7E2U8 309 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 ENDOD1O94919 500 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 C7P10643 843 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 MAOBP27338 520 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 GSCP56915 257 aaPredicted RBP21.02■□□□□ 0.96
HDAC4-209ENST00000487617 C15orf59Q2T9L4 293 aaPredicted RBP21.02■□□□□ 0.96
HDAC4-209ENST00000487617 CCDC14Q49A88 953 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 TTC31Q49AM3 519 aaPredicted RBP21.02■□□□□ 0.96
HDAC4-209ENST00000487617 ALFQ53S48 1182 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 C9orf64Q5T6V5 341 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 MON1BQ7L1V2 547 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 IRF2BP2Q7Z5L9 587 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 ALG14Q96F25 216 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 TMEM9BQ9NQ34 198 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 VPS28Q9UK41 221 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 SLC6A14Q9UN76 642 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 TBC1D30Q9Y2I9 924 aa21.02■□□□□ 0.96
HDAC4-209ENST00000487617 ITIH6Q6UXX5 1313 aa21.02■□□□□ 0.95
HDAC4-209ENST00000487617 LRRC53A6NM62 1247 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 DRGXA6NNA5 263 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 E9PAM4 449 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 SRGAP2O75044 1071 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 RHOCP08134 193 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 SERPINF2P08697 491 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 C1QBPQ07021 282 aaKnown RBP21.01■□□□□ 0.95
HDAC4-209ENST00000487617 RAB6CQ53S08 254 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 SH3PXD2AQ5TCZ1 1133 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 LUZP1Q86V48 1076 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 C3orf20Q8ND61 904 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 GANCQ8TET4 914 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 RAB6CQ9H0N0 254 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 MUC3BQ9H195 1237 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 FSCN3Q9NQT6 498 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 MPP6Q9NZW5 540 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 SLC25A13Q9UJS0 675 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 GON4LQ3T8J9 2241 aa21.01■□□□□ 0.95
HDAC4-209ENST00000487617 METTL12A8MUP2 240 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 CDX4O14627 284 aaPredicted RBP21■□□□□ 0.95
HDAC4-209ENST00000487617 TM4SF5O14894 197 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 GNSP15586 552 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 ENGP17813 658 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 TNFAIP3P21580 790 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 KCNA4P22459 653 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 ACSL1P33121 698 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 RFC1P35251 1148 aaPredicted RBP21■□□□□ 0.95
HDAC4-209ENST00000487617 PTPN9P43378 593 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 MAPK8P45983 427 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 GFPT1Q06210 699 aaPredicted RBP21■□□□□ 0.95
HDAC4-209ENST00000487617 NR1I3Q14994 352 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 ASIC2Q16515 512 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 ARL13BQ3SXY8 428 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 PPM1JQ5JR12 505 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 DCAF12L1Q5VU92 463 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 DAB2IPQ5VWQ8 1189 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 ACAD10Q6JQN1 1059 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 DNAJC24Q6P3W2 148 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 LRSAM1Q6UWE0 723 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 TFAP2DQ7Z6R9 452 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 MMAAQ8IVH4 418 aaKnown RBP21■□□□□ 0.95
HDAC4-209ENST00000487617 STK40Q8N2I9 435 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 PTPRN2Q92932 1015 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 BTBD1Q9H0C5 482 aa21■□□□□ 0.95
HDAC4-209ENST00000487617 PABPC3Q9H361 631 aaKnown RBP21■□□□□ 0.95
HDAC4-209ENST00000487617 SUSD2Q9UGT4 822 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms