RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 LCMT1Q9UIC8 334 aa18.29■□□□□ 0.52
SREBF1-213ENST00000485080 NEU3Q9UQ49 428 aa18.29■□□□□ 0.52
SREBF1-213ENST00000485080 MUC22E2RYF6 1773 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-213ENST00000485080 ILVBLA1L0T0 632 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 WASH3PC4AMC7 463 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 FAM72CH0Y354 149 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 SRGAP2O75044 1071 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 LRCH4O75427 683 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 LRIG2O94898 1065 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 LCA5LO95447 670 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 TMEM253P0C7T8 217 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 RHOQP17081 205 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 ECT2LQ008S8 904 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 CAMK2GQ13555 558 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-213ENST00000485080 STARD3Q14849 445 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 C6orf118Q5T5N4 469 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 FAM72AQ5TYM5 149 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 FAM72DQ6L9T8 149 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 SCYL2Q6P3W7 929 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 SERPINA13PQ6UXR4 307 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 NLRP14Q86W24 1093 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 FAM72BQ86X60 149 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 CCDC170Q8IYT3 715 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 MDGA1Q8NFP4 955 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 GAB3Q8WWW8 586 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 CTNNBL1Q8WYA6 563 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-213ENST00000485080 ARHGEF26Q96DR7 871 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 MYO19Q96H55 970 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 MRGPRX3Q96LB0 322 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 NUP85Q9BW27 656 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 FBRSQ9HAH7 460 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 TMEM248Q9NWD8 314 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 MPP6Q9NZW5 540 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 IP6K2Q9UHH9 426 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 INTUQ9ULD6 942 aa18.28■□□□□ 0.52
SREBF1-213ENST00000485080 CXorf51AA0A1B0GTR3 108 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 HRO43593 1189 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 PRKCHP24723 683 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 MZF1P28698 734 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-213ENST00000485080 MIPP30301 263 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 WASP42768 502 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 MAPKAPK2P49137 400 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 ZNF135P52742 658 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-213ENST00000485080 TCEAL1Q15170 157 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 HEATR6Q6AI08 1181 aaKnown RBP18.27■□□□□ 0.52
SREBF1-213ENST00000485080 ANO7Q6IWH7 933 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 KIAA1211LQ6NV74 962 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 CYP4V2Q6ZWL3 525 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-213ENST00000485080 METTL3Q86U44 580 aaKnown RBP18.27■□□□□ 0.52
SREBF1-213ENST00000485080 APCDD1Q8J025 514 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 SUMF1Q8NBK3 374 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 OR52K2Q8NGK3 314 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 CYB5D2Q8WUJ1 264 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 NKD2Q969F2 451 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-213ENST00000485080 TBC1D31Q96DN5 1066 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 IMPACTQ9P2X3 320 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 SUN2Q9UH99 717 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 ERVW-1Q9UQF0 538 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 CHD5Q8TDI0 1954 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 SDK1Q7Z5N4 2213 aa18.27■□□□□ 0.52
SREBF1-213ENST00000485080 TCRBV21S2A2A0A5A6 115 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 WASH4PA8MWX3 477 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 MYO1FO00160 1098 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 ZBTB24O43167 697 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-213ENST00000485080 PRPSAP2O60256 369 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 RHOCP08134 193 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 GABRG2P18507 467 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 OR1E1P30953 314 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 PXNP49023 591 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-213ENST00000485080 FNDC3BQ53EP0 1204 aaKnown RBP18.26■□□□□ 0.51
SREBF1-213ENST00000485080 BOLA3Q53S33 107 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 ERMARDQ5T6L9 678 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-213ENST00000485080 C11orf74Q86VG3 221 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 ZNF564Q8TBZ8 553 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-213ENST00000485080 PHOX2BQ99453 314 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 EPAS1Q99814 870 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 PACSIN1Q9BY11 444 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 MAGEB5Q9BZ81 275 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 ANAPC7Q9UJX3 599 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 EML5Q05BV3 1969 aa18.26■□□□□ 0.51
SREBF1-213ENST00000485080 SYNCRIPO60506 623 aaKnown RBP18.25■□□□□ 0.51
SREBF1-213ENST00000485080 RPP40O75818 363 aaKnown RBP18.25■□□□□ 0.51
SREBF1-213ENST00000485080 MTA2O94776 668 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 LMNAP02545 664 aaKnown RBP18.25■□□□□ 0.51
SREBF1-213ENST00000485080 ST8SIA6P61647 398 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 BYSLQ13895 437 aaKnown RBP18.25■□□□□ 0.51
SREBF1-213ENST00000485080 HNRNPA1L2Q32P51 320 aaKnown RBP18.25■□□□□ 0.51
SREBF1-213ENST00000485080 USP39Q53GS9 565 aaKnown RBP18.25■□□□□ 0.51
SREBF1-213ENST00000485080 RNF219Q5W0B1 726 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-213ENST00000485080 TFAP2DQ7Z6R9 452 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 TMTC1Q8IUR5 882 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 DCAF4L2Q8NA75 395 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 ZC3H10Q96K80 434 aaKnown RBP18.25■□□□□ 0.51
SREBF1-213ENST00000485080 MRGPRX1Q96LB2 322 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 PEBP4Q96S96 227 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 C2orf49Q9BVC5 232 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-213ENST00000485080 SPTLC3Q9NUV7 552 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 DONSONQ9NYP3 566 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 VPS28Q9UK41 221 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms