RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 TRPC5Q9UL62 973 aaPredicted RBP4.61□□□□□ -1.67
SMC4-215ENST00000484799 PCDHGB2Q9Y5G2 931 aa4.61□□□□□ -1.67
SMC4-215ENST00000484799 COMMD10Q9Y6G5 202 aa4.61□□□□□ -1.67
SMC4-215ENST00000484799 SLC4A4Q9Y6R1 1079 aa4.61□□□□□ -1.67
SMC4-215ENST00000484799 ANO9A1A5B4 782 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 LARGE1O95461 756 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 TNFRSF8P28908 595 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 PCP4P48539 62 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 HSPA7P48741 367 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 PCYT1AP49585 367 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 OAZ1P54368 228 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 RPL15P61313 204 aaKnown RBP4.6□□□□□ -1.67
SMC4-215ENST00000484799 BRD3Q15059 726 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 SLC4A8Q2Y0W8 1093 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 ENTPD8Q5MY95 495 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 PRAMEF19Q5SWL8 479 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 ATPAF1Q5TC12 328 aaPredicted RBP4.6□□□□□ -1.67
SMC4-215ENST00000484799 ZNF324BQ6AW86 544 aaPredicted RBP4.6□□□□□ -1.67
SMC4-215ENST00000484799 TRILQ7L0X0 811 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 CCDC25Q86WR0 208 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 PALB2Q86YC2 1186 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 SLC25A41Q8N5S1 370 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 OR2C3Q8N628 320 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 GABPB2Q8TAK5 448 aaPredicted RBP4.6□□□□□ -1.67
SMC4-215ENST00000484799 HMGB4Q8WW32 186 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 INPP5DQ92835 1189 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 CATSPERBQ9H7T0 1116 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 KCNK9Q9NPC2 374 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 TXLNGQ9NUQ3 528 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 FZD10Q9ULW2 581 aa4.6□□□□□ -1.67
SMC4-215ENST00000484799 MAGED2Q9UNF1 606 aaPredicted RBP4.6□□□□□ -1.67
SMC4-215ENST00000484799 RASA4BC9J798 803 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 MCIDASD6RGH6 385 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 M0QYT0 321 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 RASA4O43374 803 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 WNT1P04628 370 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 PEPDP12955 493 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 ARSBP15848 533 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 HOXA11P31270 313 aaPredicted RBP4.59□□□□□ -1.67
SMC4-215ENST00000484799 TRAF2Q12933 501 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 ARL13AQ5H913 290 aaPredicted RBP4.59□□□□□ -1.67
SMC4-215ENST00000484799 DNTTIP2Q5QJE6 756 aaKnown RBP4.59□□□□□ -1.67
SMC4-215ENST00000484799 FNBP1LQ5T0N5 605 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 TTLL5Q6EMB2 1281 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 NADSYN1Q6IA69 706 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 AAGABQ6PD74 315 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 EXOC8Q8IYI6 725 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 ADGRF3Q8IZF5 1079 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 CADM3Q8N126 398 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 IP6K1Q92551 441 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 KAT2AQ92830 837 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 MCRS1Q96EZ8 462 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 GDF15Q99988 308 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 DCLK3Q9C098 648 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 SPAG4Q9NPE6 437 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 RNF146Q9NTX7 359 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 LIN7CQ9NUP9 197 aaKnown RBP4.59□□□□□ -1.67
SMC4-215ENST00000484799 ZBTB1Q9Y2K1 713 aa4.59□□□□□ -1.67
SMC4-215ENST00000484799 GXYLT2A0PJZ3 443 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 EFCAB8A8MWE9 144 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 KIF28PB7ZC32 967 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 DNPH1O43598 174 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 PLA2G6O60733 806 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 CYP3A4P08684 503 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 NPPBP16860 134 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 TECP42680 631 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 RASSF2P50749 326 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 CYP2J2P51589 502 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 ADPRHP54922 357 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 BTKQ06187 659 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 STARD3Q14849 445 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 IZUMO4Q1ZYL8 232 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 MPEG1Q2M385 716 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 FSCBQ5H9T9 825 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 DCAF12L2Q5VW00 463 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 KDELC2Q7Z4H8 507 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 TMEM200AQ86VY9 491 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 IPO4Q8TEX9 1081 aaKnown RBP4.58□□□□□ -1.68
SMC4-215ENST00000484799 LMLNQ96KR4 655 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 SORBS1Q9BX66 1292 aaKnown RBP4.58□□□□□ -1.68
SMC4-215ENST00000484799 C6orf106Q9H6K1 298 aaPredicted RBP4.58□□□□□ -1.68
SMC4-215ENST00000484799 PLAC1Q9HBJ0 212 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 ARFGAP3Q9NP61 516 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 PNRC2Q9NPJ4 139 aaKnown RBP4.58□□□□□ -1.68
SMC4-215ENST00000484799 ARL15Q9NXU5 204 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 FBXO4Q9UKT5 387 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 RAP2CQ9Y3L5 183 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 PTGDR2Q9Y5Y4 395 aa4.58□□□□□ -1.68
SMC4-215ENST00000484799 CYP3A7-CYP3A51PA0A087WV96 503 aa4.57□□□□□ -1.68
SMC4-215ENST00000484799 DENND3A2RUS2 1198 aa4.57□□□□□ -1.68
SMC4-215ENST00000484799 KCNJ18B7U540 433 aa4.57□□□□□ -1.68
SMC4-215ENST00000484799 SPRY3O43610 288 aa4.57□□□□□ -1.68
SMC4-215ENST00000484799 RPP40O75818 363 aaKnown RBP4.57□□□□□ -1.68
SMC4-215ENST00000484799 NEURL1O76050 574 aa4.57□□□□□ -1.68
SMC4-215ENST00000484799 HLA-DQA2P01906 255 aa4.57□□□□□ -1.68
SMC4-215ENST00000484799 PKMP14618 531 aaKnown RBP4.57□□□□□ -1.68
SMC4-215ENST00000484799 CYP3A7P24462 503 aa4.57□□□□□ -1.68
SMC4-215ENST00000484799 RRP1P56182 461 aaKnown RBP4.57□□□□□ -1.68
SMC4-215ENST00000484799 HYAL1Q12794 435 aa4.57□□□□□ -1.68
SMC4-215ENST00000484799 SF3A3Q12874 501 aaKnown RBP eCLIP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms