RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 MAP7D3Q8IWC1 876 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 APCDD1Q8J025 514 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 AHI1Q8N157 1196 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 ZNF557Q8N988 423 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-224ENST00000483359 PJA1Q8NG27 643 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 SORCS1Q8WY21 1168 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 TSC1Q92574 1164 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 TRIM44Q96DX7 344 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-224ENST00000483359 ETNK2Q9NVF9 386 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 DDX56Q9NY93 547 aaKnown RBP18.31■□□□□ 0.52
CPNE1-224ENST00000483359 INTS6Q9UL03 887 aaKnown RBP18.31■□□□□ 0.52
CPNE1-224ENST00000483359 TBC1D30Q9Y2I9 924 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 K7EQS6 105 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 DCNP07585 359 aaKnown RBP18.31■□□□□ 0.52
CPNE1-224ENST00000483359 PREPLQ4J6C6 727 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-224ENST00000483359 PITRM1Q5JRX3 1037 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 Q6ZS52 159 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 TRIM58Q8NG06 486 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 OR7D4Q8NG98 312 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 FAM71BQ8TC56 605 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 ALG3Q92685 438 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 CELF6Q96J87 481 aaKnown RBP18.31■□□□□ 0.52
CPNE1-224ENST00000483359 ZNF670Q9BS34 389 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 VPS28Q9UK41 221 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 CCDC66A2RUB6 948 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 C3orf70A6NLC5 250 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-224ENST00000483359 RNF40O75150 1001 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 HTR7P34969 479 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 MAPKAPK2P49137 400 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 PLEKHG6Q3KR16 790 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 C2orf27AQ580R0 203 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 ANKRD20A8PQ5CZ79 823 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 EMC10Q5UCC4 262 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 MFSD7Q6UXD7 560 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 SETD3Q86TU7 594 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-224ENST00000483359 ADIPOR2Q86V24 386 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 ZNF354CQ86Y25 554 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 SUGP1Q8IWZ8 645 aaKnown RBP18.3■□□□□ 0.52
CPNE1-224ENST00000483359 CCDC105Q8IYK2 499 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 KATNAL2Q8IYT4 538 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 NPWQ8N729 165 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 PBXIP1Q96AQ6 731 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 LMLNQ96KR4 655 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 LMAN1LQ9HAT1 526 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 PCDHA3Q9Y5H8 950 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 ATG2BQ96BY7 2078 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 RAMP2O60895 175 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 CHRNB1P11230 501 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 CTNNA2P26232 953 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 TIE1P35590 1138 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 ZNF135P52742 658 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-224ENST00000483359 MBLAC2Q68D91 279 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 NUDT18Q6ZVK8 323 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 ZNF687Q8N1G0 1237 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 CCDC33Q8N5R6 958 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.3■□□□□ 0.52
CPNE1-224ENST00000483359 PCDH19Q8TAB3 1148 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 CYB5D2Q8WUJ1 264 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 FEM1AQ9BSK4 669 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 SPON2Q9BUD6 331 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 RCOR3Q9P2K3 495 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-224ENST00000483359 SIT1Q9Y3P8 196 aa18.3■□□□□ 0.52
CPNE1-224ENST00000483359 PI15O43692 258 aa18.29■□□□□ 0.52
CPNE1-224ENST00000483359 ACVRL1P37023 503 aa18.29■□□□□ 0.52
CPNE1-224ENST00000483359 CTSOP43234 321 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-224ENST00000483359 HCAR3P49019 387 aa18.29■□□□□ 0.52
CPNE1-224ENST00000483359 RWDD2BP57060 319 aa18.29■□□□□ 0.52
CPNE1-224ENST00000483359 DYNLT1P63172 113 aa18.29■□□□□ 0.52
CPNE1-224ENST00000483359 GNA12Q03113 381 aa18.29■□□□□ 0.52
CPNE1-224ENST00000483359 ZNF211Q13398 564 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-224ENST00000483359 KAZNQ674X7 775 aa18.29■□□□□ 0.52
CPNE1-224ENST00000483359 AADACL2Q6P093 401 aa18.29■□□□□ 0.52
CPNE1-224ENST00000483359 TMCO3Q6UWJ1 677 aa18.29■□□□□ 0.52
CPNE1-224ENST00000483359 UBL4BQ8N7F7 174 aa18.29■□□□□ 0.52
CPNE1-224ENST00000483359 DCLK1O15075 740 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 DDX3YO15523 660 aaKnown RBP18.28■□□□□ 0.52
CPNE1-224ENST00000483359 ZRANB2O95218 330 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■□□□ 12.9
CPNE1-224ENST00000483359 MAP3K6O95382 1288 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 KRT10P13645 584 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 POLR2EP19388 210 aaKnown RBP18.28■□□□□ 0.52
CPNE1-224ENST00000483359 GLDCP23378 1020 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 ZNF569Q5MCW4 686 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 EGFLAMQ63HQ2 1017 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 IL31Q6EBC2 164 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 TP53INP2Q8IXH6 220 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 ZNF513Q8N8E2 541 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-224ENST00000483359 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-224ENST00000483359 WFIKKN2Q8TEU8 576 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 ERLEC1Q96DZ1 483 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 HES6Q96HZ4 224 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 PSMB7Q99436 277 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 NOL6Q9H6R4 1146 aaKnown RBP18.28■□□□□ 0.52
CPNE1-224ENST00000483359 ATP13A1Q9HD20 1204 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 ELOVL2Q9NXB9 296 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 ILVBLA1L0T0 632 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 WASH4PA8MWX3 477 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 MIF4GDA9UHW6 222 aaKnown RBP18.28■□□□□ 0.52
CPNE1-224ENST00000483359 CBX4O00257 560 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 ENC1O14682 589 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 KIF5CO60282 957 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms