RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 KRT31Q15323 416 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 CST6Q15828 149 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 SLC25A52Q3SY17 297 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 HSP90AA4PQ58FG1 418 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 BRMS1LQ5PSV4 323 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 ACBD5Q5T8D3 534 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 TRNP1Q6NT89 227 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 APTXQ7Z2E3 356 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 C14orf80Q86SX3 495 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 GLRX5Q86SX6 157 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 XYLT1Q86Y38 959 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 CCDC117Q8IWD4 279 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 HDDC3Q8N4P3 179 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 ZCCHC9Q8N567 271 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 PPP1R9BQ96SB3 815 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 GTPBP2Q9BX10 602 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 BTBD1Q9H0C5 482 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 HSD3B7Q9H2F3 369 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 SLC32A1Q9H598 525 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 FAM204AQ9H8W3 233 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 ZNF212Q9UDV6 495 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 SERGEFQ9UGK8 458 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 NOCTQ9UK39 431 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 FZD4Q9ULV1 537 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 SIK3Q9Y2K2 1263 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 DAAM1Q9Y4D1 1078 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 CEP83Q9Y592 693 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 PCDHGB2Q9Y5G2 931 aa10.02□□□□□ -0.81
TMEM39A-207ENST00000482162 MEI4A8MW99 385 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 CLDN11O75508 207 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 ADCY5O95622 1261 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 PDGFRAP16234 1089 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 ZNF18P17022 549 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 C5AR1P21730 350 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 MMP8P22894 467 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 SLC8A1P32418 973 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 GRIA4P48058 902 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 AFF3P51826 1226 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 ATXN3P54252 364 aaPredicted RBP10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 NOMO3P69849 1222 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 FAM193AP78312 1265 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 ELAVL3Q14576 367 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 NCAPHQ15003 741 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 TTC31Q49AM3 519 aaPredicted RBP10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 RABGAP1LQ5R372 815 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 KIAA0895LQ68EN5 471 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 IL27RAQ6UWB1 636 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 FAM124AQ86V42 546 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 ERICH1Q86X53 443 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 CIR1Q86X95 450 aaPredicted RBP10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 ZNF677Q86XU0 584 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 DHX40Q8IX18 779 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 AADATQ8N5Z0 425 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 NEUROG2Q9H2A3 272 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 TM9SF3Q9HD45 589 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 FANCLQ9NW38 375 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 FBXL12Q9NXK8 326 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 TAB2Q9NYJ8 693 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 LIMA1Q9UHB6 759 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 PPM1HQ9ULR3 514 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 HS3ST2Q9Y278 367 aa10.01□□□□□ -0.81
TMEM39A-207ENST00000482162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10□□□□□ -0.81
TMEM39A-207ENST00000482162 SPAARA0A1B0GVQ0 90 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 A0A1B0GVT2 93 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 VILLO15195 856 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 EPHB6O15197 1021 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 MID1O15344 667 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 LATO43561 262 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 SH3BP5O60239 455 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 DKK1O94907 266 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 TOP3BO95985 862 aaKnown RBP10□□□□□ -0.81
TMEM39A-207ENST00000482162 CAPNS1P04632 268 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 PROS1P07225 676 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 MMEP08473 750 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 GOT1P17174 413 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 DRD3P35462 400 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 SOX5P35711 763 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 FLT3P36888 993 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 CSNK1EP49674 416 aaKnown RBP10□□□□□ -0.81
TMEM39A-207ENST00000482162 STK19P49842 368 aaPredicted RBP10□□□□□ -0.81
TMEM39A-207ENST00000482162 CCR5P51681 352 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 CDH4P55283 916 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 RACK1P63244 317 aaKnown RBP10□□□□□ -0.81
TMEM39A-207ENST00000482162 FMO1Q01740 532 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 CDR2Q01850 454 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 CENPCQ03188 943 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 SFSWAPQ12872 951 aaKnown RBP10□□□□□ -0.81
TMEM39A-207ENST00000482162 PTP4A2Q12974 167 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 NME3Q13232 169 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 ZNF177Q13360 481 aaPredicted RBP10□□□□□ -0.81
TMEM39A-207ENST00000482162 RAPGEF1Q13905 1077 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 ST3GAL2Q16842 350 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 KIF19Q2TAC6 998 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 HLA-BQ31612 363 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 ALFQ53S48 1182 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 CACUL1Q86Y37 369 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 MMAAQ8IVH4 418 aaKnown RBP10□□□□□ -0.81
TMEM39A-207ENST00000482162 STK40Q8N2I9 435 aa10□□□□□ -0.81
TMEM39A-207ENST00000482162 KDF1Q8NAX2 398 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms