RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 MIB1Q86YT6 1006 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 PSTKQ8IV42 348 aaKnown RBP14.81□□□□□ -0.04
CHD3-211ENST00000481999 PPM1NQ8N819 430 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 INPP5DQ92835 1189 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 SIGLEC10Q96LC7 697 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 SLC9A7Q96T83 725 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 PATJQ8NI35 1801 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 IQANK1A0A1B0GTG1 560 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 SPAG6O75602 509 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 HMBSP08397 361 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 TROVE2P10155 538 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHD3-211ENST00000481999 CCL5P13501 91 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 PTPN3P26045 913 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 ELF1P32519 619 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 FAAP100Q0VG06 881 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 DUSP4Q13115 394 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 BFSP2Q13515 415 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 EIF4EBP2Q13542 120 aaPredicted RBP14.81□□□□□ -0.04
CHD3-211ENST00000481999 BMPR2Q13873 1038 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 ARL13BQ3SXY8 428 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 MGAT5BQ3V5L5 792 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 ARTNQ5T4W7 220 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 CASC4Q6P4E1 433 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 FUT10Q6P4F1 479 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 CRIPAKQ8N1N5 446 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 TCP10LQ8TDR4 215 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 GIPC2Q8TF65 315 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 TMEM237Q96Q45 408 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 KLHL8Q9P2G9 620 aaPredicted RBP14.81□□□□□ -0.04
CHD3-211ENST00000481999 L3MBTL1Q9Y468 752 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 IKBKGQ9Y6K9 419 aa14.81□□□□□ -0.04
CHD3-211ENST00000481999 CCDC78A2IDD5 438 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 DFFAO00273 331 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 ZBTB24O43167 697 aaPredicted RBP14.8□□□□□ -0.04
CHD3-211ENST00000481999 MT-ND3P03897 115 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 ALDH2P05091 517 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 CD68P34810 354 aaPredicted RBP14.8□□□□□ -0.04
CHD3-211ENST00000481999 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
CHD3-211ENST00000481999 RASSF2P50749 326 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 SEMA5AQ13591 1074 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 PDK1Q15118 436 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 SERAC1Q96JX3 654 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 FCRL2Q96LA5 508 aaPredicted RBP14.8□□□□□ -0.04
CHD3-211ENST00000481999 ALG13Q9NP73 1137 aaKnown RBP14.8□□□□□ -0.04
CHD3-211ENST00000481999 A8MUI8 341 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 ANP32DO95626 131 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 TOP3BO95985 862 aaKnown RBP14.8□□□□□ -0.04
CHD3-211ENST00000481999 GALTP07902 379 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 CSH1P0DML2 217 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 CSH2P0DML3 217 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 MGAT1P26572 445 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 MAGEA3P43357 314 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 TLE2Q04725 743 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 ACCSLQ4AC99 568 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 TLDC1Q6P9B6 456 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 GPATCH11Q8N954 259 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 IRGQQ8WZA9 623 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 FRMD8Q9BZ67 464 aaPredicted RBP14.8□□□□□ -0.04
CHD3-211ENST00000481999 ABCC13Q9NSE7 274 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 KANSL3Q9P2N6 904 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 C15orf41Q9Y2V0 281 aa14.8□□□□□ -0.04
CHD3-211ENST00000481999 WDR91A4D1P6 747 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 TMEM189-UBE2V1I3L0A0 370 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 TARSP26639 723 aaKnown RBP14.79□□□□□ -0.04
CHD3-211ENST00000481999 GLUD2P49448 558 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 EFEMP1Q12805 493 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 TFAP2DQ7Z6R9 452 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 NUP93Q8N1F7 819 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 PLCD3Q8N3E9 789 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 ZNF276Q8N554 614 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 SEPT8Q92599 483 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 N4BP2L2Q92802 583 aaPredicted RBP14.79□□□□□ -0.04
CHD3-211ENST00000481999 VWCEQ96DN2 955 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 EPAS1Q99814 870 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 CXorf56Q9H5V9 222 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 PNPLA8Q9NP80 782 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 HAO1Q9UJM8 370 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 CDY1Q9Y6F8 540 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 MTMR11A4FU01 709 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 PPP1R12AO14974 1030 aaPredicted RBP14.79□□□□□ -0.04
CHD3-211ENST00000481999 F9P00740 461 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 INHBAP08476 426 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 GARSP41250 739 aaKnown RBP14.79□□□□□ -0.04
CHD3-211ENST00000481999 MAGEA6P43360 314 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 CBLBQ13191 982 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 RASIP1Q5U651 963 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 FBXO46Q6PJ61 603 aaPredicted RBP14.79□□□□□ -0.04
CHD3-211ENST00000481999 NLRP9Q7RTR0 991 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 OTOP3Q7RTS5 596 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 OR52K1Q8NGK4 314 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 SLC44A1Q8WWI5 657 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 UTP4Q969X6 686 aaKnown RBP14.79□□□□□ -0.04
CHD3-211ENST00000481999 RSRC1Q96IZ7 334 aaKnown RBP14.79□□□□□ -0.04
CHD3-211ENST00000481999 MANSC1Q9H8J5 431 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 NPHS2Q9NP85 383 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 SLC17A7Q9P2U7 560 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 VANGL2Q9ULK5 521 aa14.79□□□□□ -0.04
CHD3-211ENST00000481999 CHD9Q3L8U1 2897 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 LPXNO60711 386 aa14.78□□□□□ -0.04
CHD3-211ENST00000481999 HNRNPCL1O60812 293 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms