RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ANAPC7Q9UJX3 599 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 REXO2Q9Y3B8 237 aaKnown RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 SNX10Q9Y5X0 201 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 CKAP5Q14008 2032 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 ATRXP46100 2492 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 ATXN2Q99700 1313 aaKnown RBP9.36□□□□□ -0.91
VCP-206ENST00000480327 NEDD8-MDP1E9PL57 170 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 ACSL4O60488 711 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 PAGE1O75459 146 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 F9P00740 461 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 SLC2A3P11169 496 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 CEACAM1P13688 526 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 SLC6A4P31645 630 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 CCR1P32246 355 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 EIF2DP41214 584 aaKnown RBP9.36□□□□□ -0.91
VCP-206ENST00000480327 SSR1P43307 286 aaKnown RBP9.36□□□□□ -0.91
VCP-206ENST00000480327 SLC11A2P49281 568 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 CXCR3P49682 368 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 HDAC4P56524 1084 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 NNTQ13423 1086 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 EIF4EBP2Q13542 120 aaPredicted RBP9.36□□□□□ -0.91
VCP-206ENST00000480327 C10orf76Q5T2E6 689 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 PEAR1Q5VY43 1037 aaPredicted RBP9.36□□□□□ -0.91
VCP-206ENST00000480327 RAP1GAP2Q684P5 730 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 NADSYN1Q6IA69 706 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 PIP4P1Q86T03 277 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 CHSY1Q86X52 802 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 CPNE8Q86YQ8 564 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 NAT16Q8N8M0 369 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 ATP6V0D2Q8N8Y2 350 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 SLC35G2Q8TBE7 412 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 ZNF564Q8TBZ8 553 aaPredicted RBP9.36□□□□□ -0.91
VCP-206ENST00000480327 EXOC4Q96A65 974 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 MYEOVQ96EZ4 313 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 PGAP3Q96FM1 320 aaPredicted RBP9.36□□□□□ -0.91
VCP-206ENST00000480327 SCNM1Q9BWG6 230 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 MAGEB5Q9BZ81 275 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 CD93Q9NPY3 652 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 SPHK2Q9NRA0 654 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 PLK2Q9NYY3 685 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 PCSK1NQ9UHG2 260 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 SLC12A6Q9UHW9 1150 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 ZNF510Q9Y2H8 683 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 ADAMTS20P59510 1910 aa9.36□□□□□ -0.91
VCP-206ENST00000480327 A0A0U1RQJ8 604 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 A0A1W2PQF6 199 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 RCCD1A6NED2 376 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 KCNU1A8MYU2 1149 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 I6L893 689 aaPredicted RBP9.35□□□□□ -0.91
VCP-206ENST00000480327 MYO1FO00160 1098 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 ENDOD1O94919 500 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 ADH5P11766 374 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 DESP17661 470 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 ENGP17813 658 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 ITPKAP23677 461 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 CHKAP35790 457 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 NOP2P46087 812 aaKnown RBP9.35□□□□□ -0.91
VCP-206ENST00000480327 SGSHP51688 502 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 FAM193AP78312 1265 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 CCZ1BP86790 482 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 CCZ1P86791 482 aaPredicted RBP9.35□□□□□ -0.91
VCP-206ENST00000480327 MESDQ14696 234 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 UAP1L1Q3KQV9 507 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 FAM133BQ5BKY9 247 aaKnown RBP9.35□□□□□ -0.91
VCP-206ENST00000480327 TRIM61Q5EBN2 209 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 MS4A13Q5J8X5 152 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 BRMS1LQ5PSV4 323 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 ADGRF1Q5T601 910 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 PIK3R6Q5UE93 754 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 STRADAQ7RTN6 431 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 BNIPLQ7Z465 357 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 KIAA1328Q86T90 577 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 C11orf74Q86VG3 221 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 LGI2Q8N0V4 545 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 CFAP52Q8N1V2 620 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 ARFGAP1Q8N6T3 406 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 CCDC185Q8N715 623 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 CCDC112Q8NEF3 446 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 DDI1Q8WTU0 396 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 HMGB4Q8WW32 186 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 CENPIQ92674 756 aaPredicted RBP9.35□□□□□ -0.91
VCP-206ENST00000480327 OTUB2Q96DC9 234 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 PDLIM2Q96JY6 352 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 BTN2A3PQ96KV6 586 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 BBS2Q9BXC9 721 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 LUC7LQ9NQ29 371 aaKnown RBP9.35□□□□□ -0.91
VCP-206ENST00000480327 ARHGEF4Q9NR80 690 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 GPATCH2LQ9NWQ4 482 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 ARHGEF38Q9NXL2 777 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 STIM2Q9P246 746 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 UVRAGQ9P2Y5 699 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 IP6K2Q9UHH9 426 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 PILRBQ9UKJ0 227 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 INTUQ9ULD6 942 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 HS3ST4Q9Y661 456 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 DUSP10Q9Y6W6 482 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 MUC22E2RYF6 1773 aaPredicted RBP9.35□□□□□ -0.91
VCP-206ENST00000480327 IGSF10Q6WRI0 2623 aa9.35□□□□□ -0.91
VCP-206ENST00000480327 SPAARA0A1B0GVQ0 90 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 TCRBV21S2A2A0A5A6 115 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms