RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 SPATA31A5Q5VU36 1347 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 SPATA31A6Q5VVP1 1343 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 SPATA31A7Q8IWB4 1347 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 PASKQ96RG2 1323 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 AGAP14A8MT82 685 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 C17orf100A8MU93 164 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 CCNT1O60563 726 aaKnown RBP5.58□□□□□ -1.52
UPF3B-203ENST00000478840 SEC14L2O76054 403 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 CHRM4P08173 479 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 SLC3A2P08195 630 aaKnown RBP5.58□□□□□ -1.52
UPF3B-203ENST00000478840 HOXB9P17482 250 aaPredicted RBP5.58□□□□□ -1.52
UPF3B-203ENST00000478840 ATF7P17544 494 aaPredicted RBP5.58□□□□□ -1.52
UPF3B-203ENST00000478840 FPR3P25089 353 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 ZNF84P51523 738 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 ADPRHP54922 357 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 EEFSECP57772 596 aaKnown RBP5.58□□□□□ -1.52
UPF3B-203ENST00000478840 RPL7AP62424 266 aaKnown RBP5.58□□□□□ -1.52
UPF3B-203ENST00000478840 CREB5Q02930 508 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 DMWDQ09019 674 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 CNGA3Q16281 694 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 FAM133BQ5BKY9 247 aaKnown RBP5.58□□□□□ -1.52
UPF3B-203ENST00000478840 NAPEPLDQ6IQ20 393 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 KLHL24Q6TFL4 600 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 RTL10Q7L3V2 364 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 MRGPREQ86SM8 312 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 BRSK2Q8IWQ3 736 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 CHST13Q8NET6 341 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 LBHD1Q9BQE6 289 aaPredicted RBP5.58□□□□□ -1.52
UPF3B-203ENST00000478840 ADGRE3Q9BY15 652 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 WDR11Q9BZH6 1224 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 TRIM31Q9BZY9 425 aa5.58□□□□□ -1.52
UPF3B-203ENST00000478840 SEPT11Q9NVA2 429 aaKnown RBP5.58□□□□□ -1.52
UPF3B-203ENST00000478840 SIRT4Q9Y6E7 314 aaPredicted RBP5.58□□□□□ -1.52
UPF3B-203ENST00000478840 A0A0G2JLL6 359 aaPredicted RBP5.57□□□□□ -1.52
UPF3B-203ENST00000478840 MCIDASD6RGH6 385 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 DSCR3O14972 297 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 PER2O15055 1255 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 FYB1O15117 783 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 CNTN5O94779 1100 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 TTLL1O95922 423 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 ALDOCP09972 364 aaKnown RBP5.57□□□□□ -1.52
UPF3B-203ENST00000478840 PORP16435 677 aaPredicted RBP5.57□□□□□ -1.52
UPF3B-203ENST00000478840 NDUFB7P17568 137 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 RRM1P23921 792 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 ICAM3P32942 547 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 GRIA3P42263 894 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 EIF3BP55884 814 aaKnown RBP5.57□□□□□ -1.52
UPF3B-203ENST00000478840 SHC2P98077 582 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 GLE1Q53GS7 698 aaKnown RBP5.57□□□□□ -1.52
UPF3B-203ENST00000478840 FBLN7Q53RD9 439 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 UBAP2Q5T6F2 1119 aaKnown RBP5.57□□□□□ -1.52
UPF3B-203ENST00000478840 AADACL2Q6P093 401 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 RNF207Q6ZRF8 634 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 BCDIN3DQ7Z5W3 292 aaKnown RBP5.57□□□□□ -1.52
UPF3B-203ENST00000478840 CNOT9Q92600 299 aaKnown RBP5.57□□□□□ -1.52
UPF3B-203ENST00000478840 COQ10AQ96MF6 247 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 GPR78Q96P69 363 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 MPHOSPH8Q99549 860 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 BDH2Q9BUT1 245 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 C1QTNF3Q9BXJ4 246 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 HCFC1R1Q9NWW0 138 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 SYBUQ9NX95 663 aa5.57□□□□□ -1.52
UPF3B-203ENST00000478840 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.56□□□□□ -1.52
UPF3B-203ENST00000478840 C16orf96A6NNT2 1141 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 B4DLN1 442 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 K7ESM1 405 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 QSOX1O00391 747 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 AP3D1O14617 1153 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 MT-CO3P00414 261 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 C1SP09871 688 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 RFPL3SP0C7P2 107 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 CDH2P19022 906 aaPredicted RBP5.56□□□□□ -1.52
UPF3B-203ENST00000478840 PSMB10P40306 273 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 OAZ1P54368 228 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 EFNB1P98172 346 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 MFSD13AQ14CX5 517 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 WTAPQ15007 396 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 CDSNQ15517 529 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 SLC18A3Q16572 532 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 DUSP28Q4G0W2 176 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 SLC9B1Q4ZJI4 515 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 LY6G5CQ5SRR4 150 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 KCNV1Q6PIU1 500 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 C17orf99Q6UX52 265 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 KRT74Q7RTS7 529 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 ZNF804AQ7Z570 1209 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 PEG10Q86TG7 708 aaKnown RBP5.56□□□□□ -1.52
UPF3B-203ENST00000478840 PLD5Q8N7P1 536 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 MAFAQ8NHW3 353 aaPredicted RBP5.56□□□□□ -1.52
UPF3B-203ENST00000478840 PROKR1Q8TCW9 393 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 C2CD4CQ8TF44 421 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 LINC00476Q8WZB0 136 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 TBC1D5Q92609 795 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 DVL3Q92997 716 aaPredicted RBP5.56□□□□□ -1.52
UPF3B-203ENST00000478840 KIF1BPQ96EK5 621 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 PERPQ96FX8 193 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 P2RY11Q96G91 374 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 HIC2Q96JB3 615 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 MMS19Q96T76 1030 aa5.56□□□□□ -1.52
UPF3B-203ENST00000478840 GATA5Q9BWX5 397 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms