RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ZNF787Q6DD87 383 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 BORAQ6PGQ7 559 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 RAB11FIP2Q7L804 512 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 B3GNT8Q7Z7M8 397 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 SLC22A18ASQ8N1D0 253 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 STK40Q8N2I9 435 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 WDR48Q8TAF3 677 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 PTPRN2Q92932 1015 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 SYAP1Q96A49 352 aaPredicted RBP7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 PLD4Q96BZ4 506 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 DNAJC19Q96DA6 116 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 POM121Q96HA1 1249 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 LLPHQ9BRT6 129 aaKnown RBP7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 SLC12A9Q9BXP2 914 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 KIAA1586Q9HCI6 787 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 FAM49BQ9NUQ9 324 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 NCKIPSDQ9NZQ3 722 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 SEPT10Q9P0V9 454 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 HMGXB4Q9UGU5 601 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 SLCO3A1Q9UIG8 710 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 SALL4Q9UJQ4 1053 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 CSNK1G3Q9Y6M4 447 aa7.6□□□□□ -1.19
SPTLC1-205ENST00000477888 OTOGQ6ZRI0 2925 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 ITIH6Q6UXX5 1313 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 EDDM13A0A1B0GTR0 161 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 SLC7A4O43246 635 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 AGFG2O95081 481 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 IL1BP01584 269 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 ASLP04424 464 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 SLFN14P0C7P3 912 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 RNF224P0DH78 156 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 HGFP14210 728 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 GAP43P17677 238 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 MZF1P28698 734 aaPredicted RBP7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 ADORA2BP29275 332 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 CSKP41240 450 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 NDST1P52848 882 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 ANAPC15P60006 121 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 TRPC3Q13507 836 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 DRAP1Q14919 205 aaPredicted RBP7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 PSMD6Q15008 389 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 SNRNP35Q16560 246 aaKnown RBP7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 SETMARQ53H47 684 aaPredicted RBP7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 RILPL1Q5EBL4 403 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 TMCO4Q5TGY1 634 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 PIK3R6Q5UE93 754 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 RSRC2Q7L4I2 434 aaKnown RBP7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 DSG4Q86SJ6 1040 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 UNC93AQ86WB7 457 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 ATCAYQ86WG3 371 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 JAMLQ86YT9 394 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 ZNF548Q8NEK5 533 aaPredicted RBP7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 OR13H1Q8NG92 308 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 FIBINQ8TAL6 211 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 SSC4DQ8WTU2 575 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 JAKMIP2Q96AA8 810 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 ELMO3Q96BJ8 720 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 CCDC127Q96BQ5 260 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 NOX5Q96PH1 765 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 CGRRF1Q99675 332 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 REPIN1Q9BWE0 567 aaKnown RBP7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 ZNF768Q9H5H4 540 aaKnown RBP7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 STRIP2Q9ULQ0 834 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 ERVW-1Q9UQF0 538 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 ZFHX3Q15911 3703 aa7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 SPENQ96T58 3664 aaKnown RBP7.59□□□□□ -1.19
SPTLC1-205ENST00000477888 FRMD3A2A2Y4 597 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 VPS37CA5D8V6 355 aaPredicted RBP7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 TPP1O14773 563 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 MUSKO15146 869 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 SLC31A1O15431 190 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 MTSS1O43312 755 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 LATS1O95835 1130 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 CSF2P04141 144 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 SRPRAP08240 638 aaKnown RBP7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 COL8A1P27658 744 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 HOXD13P35453 343 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 DCTP40126 519 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 CTSOP43234 321 aaPredicted RBP7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 OXCT1P55809 520 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 TAS2R38P59533 333 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 HNRNPKP61978 463 aaKnown RBP eCLIP7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 CYP24A1Q07973 514 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 ALCAMQ13740 583 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 SPIDRQ14159 915 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 ELAVL3Q14576 367 aaKnown RBP7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 NR0B2Q15466 257 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 ZNF667Q5HYK9 610 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 AGBL4Q5VU57 503 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 ABI3BPQ7Z7G0 1075 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 ZFAND4Q86XD8 727 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 CYFIP2Q96F07 1278 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 CCDC3Q9BQI4 270 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 BOCQ9BWV1 1114 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 CALN1Q9BXU9 219 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 IRX2Q9BZI1 471 aaPredicted RBP7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 ZNF71Q9NQZ8 489 aaPredicted RBP7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 GPR27Q9NS67 375 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 DNAJC28Q9NX36 388 aa7.58□□□□□ -1.2
SPTLC1-205ENST00000477888 KLF15Q9UIH9 416 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms