RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 EBF2Q9HAK2 575 aa11.73□□□□□ -0.53
HDLBP-236ENST00000477477 ASNSD1Q9NWL6 643 aa11.73□□□□□ -0.53
HDLBP-236ENST00000477477 DDIT4Q9NX09 232 aa11.73□□□□□ -0.53
HDLBP-236ENST00000477477 APEX2Q9UBZ4 518 aa11.73□□□□□ -0.53
HDLBP-236ENST00000477477 SLC12A6Q9UHW9 1150 aa11.73□□□□□ -0.53
HDLBP-236ENST00000477477 RWDD2AQ9UIY3 292 aa11.73□□□□□ -0.53
HDLBP-236ENST00000477477 HSF2BPO75031 334 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 WNT1P04628 370 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 SLC2A3P11169 496 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 VAV1P15498 845 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 PDGFRAP16234 1089 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 GOT1P17174 413 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 SLC9A1P19634 815 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 ABCB4P21439 1286 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 C5AR1P21730 350 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 CCR1P32246 355 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 NNMTP40261 264 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 USP8P40818 1118 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 CCR5P51681 352 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 PLK1P53350 603 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 ADPRHP54922 357 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 OXCT1P55809 520 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 APBA1Q02410 837 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 SULT2A1Q06520 285 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 KCNJ12Q14500 433 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 ARHGAP44Q17R89 818 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 RABGAP1LQ5R372 815 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 CXorf57Q6NSI4 855 aaKnown RBP11.72□□□□□ -0.53
HDLBP-236ENST00000477477 FBXL22Q6P050 247 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 LRSAM1Q6UWE0 723 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 GBP6Q6ZN66 633 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 SND1Q7KZF4 910 aaKnown RBP eCLIP11.72□□□□□ -0.53
HDLBP-236ENST00000477477 GALNT15Q8N3T1 639 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 WDTC1Q8N5D0 677 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 SHC3Q92529 594 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 SKA1Q96BD8 255 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 ELF4Q99607 663 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-236ENST00000477477 TPX2Q9ULW0 747 aaKnown RBP11.72□□□□□ -0.53
HDLBP-236ENST00000477477 PCDHGC3Q9UN70 934 aa11.72□□□□□ -0.53
HDLBP-236ENST00000477477 CABIN1Q9Y6J0 2220 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 LAMA5O15230 3695 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 SYNJ2BP-COX16A0A087WUM0 186 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 A0A1W2PR77 199 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 GTPBP10A4D1E9 387 aaKnown RBP11.71□□□□□ -0.53
HDLBP-236ENST00000477477 IL1BP01584 269 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 DRD3P35462 400 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 NUMBP49757 651 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-236ENST00000477477 CENPCQ03188 943 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 EXOC3L4Q17RC7 722 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 EFHC1Q5JVL4 640 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 SMYD5Q6GMV2 418 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 OLFML1Q6UWY5 402 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 FAM183BPQ6ZVS7 135 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 PASD1Q8IV76 773 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 C1orf131Q8NDD1 294 aaKnown RBP11.71□□□□□ -0.53
HDLBP-236ENST00000477477 OR14C36Q8NHC7 312 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 MDM1Q8TC05 714 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 FRS2Q8WU20 508 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 RNF34Q969K3 372 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 FAM131CQ96AQ9 280 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 SPAG5Q96R06 1193 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 AASDHPPTQ9NRN7 309 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 COX16Q9P0S2 106 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 FTSJ1Q9UET6 329 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 GPSM3Q9Y4H4 160 aa11.71□□□□□ -0.53
HDLBP-236ENST00000477477 ITPR1Q14643 2758 aa11.71□□□□□ -0.54
HDLBP-236ENST00000477477 WNT9AO14904 365 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 YKT6O15498 198 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 LATO43561 262 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 ATP9BO43861 1147 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 DAB1O75553 588 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 GRAP2O75791 330 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 ERBB2P04626 1255 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 HOXB3P14651 431 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-236ENST00000477477 PON1P27169 355 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 CD38P28907 300 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 IRAK1P51617 712 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 METAP1P53582 386 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 PPP2CBP62714 309 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 PPP2CAP67775 309 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 NME3Q13232 169 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 MTA1Q13330 715 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 AUHQ13825 339 aaKnown RBP11.7□□□□□ -0.54
HDLBP-236ENST00000477477 SHBQ15464 509 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 SMAD1Q15797 465 aaKnown RBP11.7□□□□□ -0.54
HDLBP-236ENST00000477477 PTPN20Q4JDL3 420 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 PRAMEF14Q5SWL7 426 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 C11orf57Q6ZUT1 292 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-236ENST00000477477 DSG4Q86SJ6 1040 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 MARCH9Q86YJ5 346 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 GATAD2AQ86YP4 633 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 IRF2BP1Q8IU81 584 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 CREBRFQ8IUR6 639 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 OR52K2Q8NGK3 314 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 OR8D1Q8WZ84 308 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 ALG14Q96F25 216 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 SERAC1Q96JX3 654 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms