RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	BCAR1	P56945	870 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	STX17	P56962	302 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ERVK-21	P61565	698 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	YWHAE	P62258	255 aa	Known RBP	4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ENPEP	Q07075	957 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	PSMD6	Q15008	389 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	NFIL3	Q16649	462 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	EPC2	Q52LR7	807 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	GLRA4	Q5JXX5	417 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	FKBP15	Q5T1M5	1219 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	SPATA1	Q5VX52	437 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	FAM109B	Q6ICB4	259 aa	Predicted RBP	4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	JADE1	Q6IE81	842 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CENPP	Q6IPU0	288 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	FOXR2	Q6PJQ5	311 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	FGD2	Q7Z6J4	655 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CEP57	Q86XR8	500 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	WDR49	Q8IV35	697 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	THEM5	Q8N1Q8	247 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	COLGALT1	Q8NBJ5	622 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	GPT2	Q8TD30	523 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ZNF689	Q96CS4	500 aa	Predicted RBP	4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TMEM176A	Q96HP8	235 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CASD1	Q96PB1	797 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CGRRF1	Q99675	332 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CBWD1	Q9BRT8	395 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	STRA6	Q9BX79	667 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	NRDE2	Q9H7Z3	1164 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ENTPD7	Q9NQZ7	604 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	MRPL17	Q9NRX2	175 aa	Known RBP	4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TBC1D13	Q9NVG8	400 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	DPP3	Q9NY33	737 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ITGA11	Q9UKX5	1188 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	PRG3	Q9Y2Y8	225 aa	Predicted RBP	4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	LTBP2	Q14767	1821 aa		4.81	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CENPF	P49454	3210 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TTC26	A0AVF1	554 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	KRTAP23-1	A1A580	65 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	SYCE3	A1L190	88 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289		H3BNC9	293 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	NRP1	O14786	923 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	INPPL1	O15357	1258 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TGFB1I1	O43294	461 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	NCK2	O43639	380 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	PPFIA2	O75334	1257 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ODC1	P11926	461 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	EEF1G	P26641	437 aa	Known RBP	4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	APEX1	P27695	318 aa	Known RBP	4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ADSS	P30520	456 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ATIC	P31939	592 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ELF1	P32519	619 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	GTF2H1	P32780	548 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TNFSF9	P41273	254 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	PIK3CA	P42336	1068 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	GATM	P50440	423 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TNNC1	P63316	161 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	MYL5	Q02045	173 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ALDH6A1	Q02252	535 aa	Known RBP	4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TAP1	Q03518	808 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CYP24A1	Q07973	514 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	BFSP1	Q12934	665 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ADAM15	Q13444	863 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	RIN1	Q13671	783 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	SMC1A	Q14683	1233 aa	Known RBP	4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ACAP1	Q15027	740 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TCTN1	Q2MV58	587 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	SGSM1	Q2NKQ1	1148 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	USP41	Q3LFD5	358 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TMEM177	Q53S58	311 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ZNF667	Q5HYK9	610 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CLLU1OS	Q5K130	101 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	KRT39	Q6A163	491 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ANKRD40	Q6AI12	368 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ADGRE4P	Q86SQ3	457 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	DDX53	Q86TM3	631 aa	Known RBP	4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CBWD2	Q8IUF1	395 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	COLGALT2	Q8IYK4	626 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	D2HGDH	Q8N465	521 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TTC39C	Q8N584	583 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	DEFB123	Q8N688	67 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	LRRC52	Q8N7C0	313 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TMEM174	Q8WUU8	243 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	POF1B	Q8WVV4	589 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	NEU4	Q8WWR8	484 aa	Predicted RBP	4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TAF4B	Q92750	862 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	FAM81B	Q96LP2	452 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	MMS19	Q96T76	1030 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	DNAJC7	Q99615	494 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	FGFBP2	Q9BYJ0	223 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	KCTD10	Q9H3F6	313 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TSPY26P	Q9H489	355 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	THAP9	Q9H5L6	903 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	MMRN2	Q9H8L6	949 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CERS4	Q9HA82	394 aa		4.8	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TRIM39	Q9HCM9	518 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms