RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TWNKQ96RR1 684 aa5.46□□□□□ -1.54
PTCD3-211ENST00000476215 MOV10Q9HCE1 1003 aaKnown RBP5.46□□□□□ -1.54
PTCD3-211ENST00000476215 TXNRD2Q9NNW7 524 aa5.46□□□□□ -1.54
PTCD3-211ENST00000476215 THAP1Q9NVV9 213 aa5.46□□□□□ -1.54
PTCD3-211ENST00000476215 ARL15Q9NXU5 204 aa5.46□□□□□ -1.54
PTCD3-211ENST00000476215 KLQ9UEF7 1012 aa5.46□□□□□ -1.54
PTCD3-211ENST00000476215 FBXO4Q9UKT5 387 aa5.46□□□□□ -1.54
PTCD3-211ENST00000476215 PKP3Q9Y446 797 aa5.46□□□□□ -1.54
PTCD3-211ENST00000476215 LRRFIP2Q9Y608 721 aaKnown RBP5.46□□□□□ -1.54
PTCD3-211ENST00000476215 SAC3D1A6NKF1 404 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 SYN3O14994 580 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 TP73O15350 636 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 NFATC1O95644 943 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 PYGLP06737 847 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 POLBP06746 335 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 CNPP09543 421 aaKnown RBP5.45□□□□□ -1.54
PTCD3-211ENST00000476215 PRR35P0CG20 571 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 HOXB9P17482 250 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-211ENST00000476215 KELP23276 732 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 GSTM2P28161 218 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 CPA2P48052 419 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 OAZ1P54368 228 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 CFHR1Q03591 330 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 DAZAP2Q15038 168 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-211ENST00000476215 SRSF7Q16629 238 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTCD3-211ENST00000476215 GXYLT1Q4G148 440 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 CBWD5Q5RIA9 395 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 C10orf76Q5T2E6 689 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 SLC30A9Q6PML9 568 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 RTL10Q7L3V2 364 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 SCN4BQ8IWT1 228 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 BCAS4Q8TDM0 211 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 HERVK_113Q902F9 699 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 IP6K1Q92551 441 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 STAMQ92783 540 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 CUL5Q93034 780 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 PPP1R10Q96QC0 940 aaKnown RBP5.45□□□□□ -1.54
PTCD3-211ENST00000476215 NRIP3Q9NQ35 241 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 SLC22A11Q9NSA0 550 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 TNFSF13BQ9Y275 285 aa5.45□□□□□ -1.54
PTCD3-211ENST00000476215 CYP2D7A0A087X1C5 515 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 VWA3AA6NCI4 1184 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 ANP32CO43423 234 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 CCNT1O60563 726 aaKnown RBP5.44□□□□□ -1.54
PTCD3-211ENST00000476215 BCAR3O75815 825 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 CYP4B1P13584 511 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 TNNT1P13805 278 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 AVPR2P30518 371 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 RPS6KA3P51812 740 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 RPS13P62277 151 aaKnown RBP5.44□□□□□ -1.54
PTCD3-211ENST00000476215 ZNF91Q05481 1191 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 EZH2Q15910 746 aaKnown RBP5.44□□□□□ -1.54
PTCD3-211ENST00000476215 MAP3K21Q5TCX8 1036 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 SLC2A7Q6PXP3 512 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 FAM57BQ71RH2 274 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 RNF144BQ7Z419 303 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 KLBQ86Z14 1044 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 USP38Q8NB14 1042 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 FAM110DQ8TAY7 271 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-211ENST00000476215 MAELQ96JY0 434 aaKnown RBP5.44□□□□□ -1.54
PTCD3-211ENST00000476215 REEP2Q9BRK0 252 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 PRSS22Q9GZN4 317 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 ACAD9Q9H845 621 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 TLR8Q9NR97 1041 aaKnown RBP5.44□□□□□ -1.54
PTCD3-211ENST00000476215 C9orf78Q9NZ63 289 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-211ENST00000476215 DTX4Q9Y2E6 619 aa5.44□□□□□ -1.54
PTCD3-211ENST00000476215 CXorf65A6NEN9 183 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 KLK10O43240 276 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 MSI1O43347 362 aaKnown RBP5.43□□□□□ -1.54
PTCD3-211ENST00000476215 TSPAN3O60637 253 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 UGDHO60701 494 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 GOLGA8FQ08AF8 430 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 GALNT3Q14435 633 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 PGM5Q15124 567 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 DLGAP5Q15398 846 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 ZNF425Q6IV72 752 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 LRIG3Q6UXM1 1119 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 CYB5R4Q7L1T6 521 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 UBE2Q1Q7Z7E8 422 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 C2CD4CQ8TF44 421 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 SCARB1Q8WTV0 552 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 SMG7Q92540 1137 aaKnown RBP5.43□□□□□ -1.54
PTCD3-211ENST00000476215 ZNF778Q96MU6 729 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 SIGLEC11Q96RL6 698 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 TMEM184CQ9NVA4 438 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 GGA3Q9NZ52 723 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 BTBD3Q9Y2F9 522 aa5.43□□□□□ -1.54
PTCD3-211ENST00000476215 TCRBV7S3A2A0A539 114 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 DPPA5A6NC42 116 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 KCNJ18B7U540 433 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 PEX12O00623 359 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 METTL18O95568 372 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 WEE2P0C1S8 567 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 CTSAP10619 480 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 ARSAP15289 507 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 TYK2P29597 1187 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 CIITAP33076 1130 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 STAT1P42224 750 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 CCR5P51681 352 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 MVDP53602 400 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms