RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 CDH9Q9ULB4 789 aa3.94□□□□□ -1.78
LSM2-211ENST00000475835 PADI4Q9UM07 663 aa3.94□□□□□ -1.78
LSM2-211ENST00000475835 CAPN11Q9UMQ6 739 aa3.94□□□□□ -1.78
LSM2-211ENST00000475835 PCDHA7Q9UN72 937 aa3.94□□□□□ -1.78
LSM2-211ENST00000475835 PACSIN2Q9UNF0 486 aaPredicted RBP3.94□□□□□ -1.78
LSM2-211ENST00000475835 EIF3LQ9Y262 564 aaKnown RBP3.94□□□□□ -1.78
LSM2-211ENST00000475835 CRYL1Q9Y2S2 319 aa3.94□□□□□ -1.78
LSM2-211ENST00000475835 ACOT9Q9Y305 439 aa3.94□□□□□ -1.78
LSM2-211ENST00000475835 GMPPBQ9Y5P6 360 aa3.94□□□□□ -1.78
LSM2-211ENST00000475835 YLPM1P49750 1951 aaKnown RBP3.94□□□□□ -1.78
LSM2-211ENST00000475835 UTYO14607 1347 aa3.94□□□□□ -1.78
LSM2-211ENST00000475835 AOX1Q06278 1338 aa3.94□□□□□ -1.78
LSM2-211ENST00000475835 MYH9P35579 1960 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 TMEM120BA0PK00 339 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 FAM83GA6ND36 823 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SIGLEC16A6NMB1 481 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 B4E171 279 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 ERVV-1B6SEH8 477 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 H0YIN7 160 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 ZNF701M0R085 212 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 EYA2O00167 538 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 KPNA4O00629 521 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 ANGPT2O15123 496 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SLC22A2O15244 555 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 OGTO15294 1046 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 GPRIN2O60269 458 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 GRIN3BO60391 1043 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 PFKFB2O60825 505 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 PEX11AO75192 247 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 IPO13O94829 963 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 APOL3O95236 402 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 NSA2O95478 260 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 FTCDO95954 541 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 OTCP00480 354 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 PGK2P07205 417 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 GJB1P08034 283 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SNRNP70P08621 437 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 ACAA1P09110 424 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 SPATA31D3P0C874 917 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 TPBGLP0DKB5 382 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SAGP10523 405 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 TXNP10599 105 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 FDPSP14324 419 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 LTKP29376 864 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SERPINB1P30740 379 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 CDH5P33151 784 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 GPC1P35052 558 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 GGCXP38435 758 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 EIF4A3P38919 411 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 IL6STP40189 918 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 EIF2S3P41091 472 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 CCR10P46092 362 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 IREB2P48200 963 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 ANXA11P50995 505 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 ALDH5A1P51649 535 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 VAV2P52735 878 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 MAPK12P53778 367 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 AK2P54819 239 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 CDH4P55283 916 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 HUNKP57058 714 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 CABP4P57796 275 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 RTP1P59025 263 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 RPP30P78346 268 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 MAT1AQ00266 395 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 TAP2Q03519 686 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 GLO1Q04760 184 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 UBE3AQ05086 875 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 IFRD2Q12894 506 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 LMAN2Q12907 356 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 ZNF177Q13360 481 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 RRP1BQ14684 758 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 ODF1Q14990 250 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 VEPH1Q14D04 833 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 PRKD1Q15139 912 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 PON2Q15165 354 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 KRT31Q15323 416 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 CHRNA6Q15825 494 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 CAMK4Q16566 473 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 MEA1Q16626 185 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 ZNF829Q3KNS6 432 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 RARS2Q5T160 578 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 AGAP7PQ5VUJ5 663 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 GARNL3Q5VVW2 1013 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SLC30A6Q6NXT4 461 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SYCE2Q6PIF2 218 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 MSANTD1Q6ZTZ1 278 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SPATA31D4Q6ZUB0 917 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 FAM47EQ6ZV65 393 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 HTR3DQ70Z44 454 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 PDZD4Q76G19 769 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 R3HCC1LQ7Z5L2 792 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 DNAJB7Q7Z6W7 309 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 TAC4Q86UU9 113 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 FAM160B2Q86V87 743 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 TPRA1Q86W33 373 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 RALGPS2Q86X27 583 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 TDRPQ86YL5 185 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 HIPK1Q86Z02 1210 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 ERI1Q8IV48 349 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms