RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 GET4Q7L5D6 327 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-217ENST00000475693 EFHBQ8N7U6 833 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 RTL3Q8N8U3 475 aaKnown RBP18.57■□□□□ 0.56
ATG4B-217ENST00000475693 CCDC110Q8TBZ0 833 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 RSAD2Q8WXG1 361 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 RSPRY1Q96DX4 576 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 PWWP2AQ96N64 755 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 GDF3Q9NR23 364 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 CLDND1Q9NY35 253 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 ZNF212Q9UDV6 495 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 DRG1Q9Y295 367 aaKnown RBP18.57■□□□□ 0.56
ATG4B-217ENST00000475693 UTP11Q9Y3A2 253 aaKnown RBP18.57■□□□□ 0.56
ATG4B-217ENST00000475693 IGLV3-10A0A075B6K4 115 aa18.56■□□□□ 0.56
ATG4B-217ENST00000475693 DRGXA6NNA5 263 aa18.56■□□□□ 0.56
ATG4B-217ENST00000475693 ADAM15Q13444 863 aa18.56■□□□□ 0.56
ATG4B-217ENST00000475693 FAXCQ5TGI0 409 aa18.56■□□□□ 0.56
ATG4B-217ENST00000475693 ZSCAN18Q8TBC5 510 aaPredicted RBP18.56■□□□□ 0.56
ATG4B-217ENST00000475693 TDP1Q9NUW8 608 aa18.56■□□□□ 0.56
ATG4B-217ENST00000475693 CLEC4EQ9ULY5 219 aa18.56■□□□□ 0.56
ATG4B-217ENST00000475693 SH3BP1Q9Y3L3 701 aa18.56■□□□□ 0.56
ATG4B-217ENST00000475693 DOCK4Q8N1I0 1966 aa18.56■□□□□ 0.56
ATG4B-217ENST00000475693 FAM153BP0C7A2 387 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 SP100P23497 879 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-217ENST00000475693 IVDP26440 423 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 ADCY8P40145 1251 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 MAGEA9P43362 315 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 FAM153CQ494X1 144 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 ARHGAP15Q53QZ3 475 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 PPP2R3CQ969Q6 453 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 CDCA3Q99618 268 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-217ENST00000475693 CATSPERBQ9H7T0 1116 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 FAM153AQ9UHL3 310 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 ACTL7AQ9Y615 435 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 VCANP13611 3396 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 SHROOM3Q8TF72 1996 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 A0A0D9SEW6 157 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 TP73O15350 636 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 ECHS1P30084 290 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 OR1E1P30953 314 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 RPL22P35268 128 aaKnown RBP18.55■□□□□ 0.56
ATG4B-217ENST00000475693 ACVRL1P37023 503 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 NR2C2P49116 596 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 NRG1Q02297 640 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-217ENST00000475693 GPS1Q13098 491 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 MTM1Q13496 603 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 Q7L0L9 218 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 TFB1MQ8WVM0 346 aaKnown RBP18.55■□□□□ 0.56
ATG4B-217ENST00000475693 FGF13Q92913 245 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 ADAM7Q9H2U9 754 aa18.55■□□□□ 0.56
ATG4B-217ENST00000475693 FAM187AA6NFU0 413 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 LTBRP36941 435 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 PAPOLAP51003 745 aaKnown RBP18.54■□□□□ 0.56
ATG4B-217ENST00000475693 PLTPP55058 493 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 SLC45A4Q5BKX6 768 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 FSCBQ5H9T9 825 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 GPR149Q86SP6 731 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 NPAS3Q8IXF0 933 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 C10orf67Q8IYJ2 551 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 WFDC5Q8TCV5 224 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 USP33Q8TEY7 942 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 HMCESQ96FZ2 354 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 ZNF419Q96HQ0 510 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-217ENST00000475693 GRHL1Q9NZI5 618 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 PPARGC1AQ9UBK2 798 aaKnown RBP18.54■□□□□ 0.56
ATG4B-217ENST00000475693 ARHGAP26Q9UNA1 814 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 MYO18AQ92614 2054 aaKnown RBP18.54■□□□□ 0.56
ATG4B-217ENST00000475693 BHMG1C9JSJ3 638 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-217ENST00000475693 TBL1XO60907 577 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 GAS8O95995 478 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 RHOQP17081 205 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 FSHRP23945 695 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 TNNT3P45378 269 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-217ENST00000475693 GAD2Q05329 585 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 PTK6Q13882 451 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 HLTFQ14527 1009 aaKnown RBP eCLIP18.54■□□□□ 0.56
ATG4B-217ENST00000475693 CCDC85BQ15834 202 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-217ENST00000475693 P3H1Q32P28 736 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 CCDC89Q8N998 374 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 AENQ8WTP8 325 aaKnown RBP18.54■□□□□ 0.56
ATG4B-217ENST00000475693 GRK7Q8WTQ7 553 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 SLCO2A1Q92959 643 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 QKIQ96PU8 341 aaKnown RBP eCLIP18.54■□□□□ 0.56
ATG4B-217ENST00000475693 FAM107BQ9H098 131 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 TMEM248Q9NWD8 314 aa18.54■□□□□ 0.56
ATG4B-217ENST00000475693 TRIOO75962 3097 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 J3KR12 359 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 ZNF197O14709 1029 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 FGF10O15520 208 aaPredicted RBP18.53■□□□□ 0.56
ATG4B-217ENST00000475693 GARSP41250 739 aaKnown RBP18.53■□□□□ 0.56
ATG4B-217ENST00000475693 CORO7P57737 925 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 GALNT2Q10471 571 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 FAM78AQ5JUQ0 283 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 ELMSAN1Q6PJG2 1045 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 TMEM184AQ6ZMB5 413 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 HTR3DQ70Z44 454 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 ZNF354CQ86Y25 554 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 IFT20Q8IY31 132 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 DNAJC17Q9NVM6 304 aaKnown RBP18.53■□□□□ 0.56
ATG4B-217ENST00000475693 WNT6Q9Y6F9 365 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 A6NNZ2 444 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms