RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 FOXQ1Q9C009 403 aa22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 NDRG2Q9UN36 371 aaKnown RBP22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 TMEM221A6NGB7 291 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 M0R296 226 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 DCLK1O15075 740 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 DDX3YO15523 660 aaKnown RBP22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 EGFP01133 1207 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 AMPD1P23109 780 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 CSKP41240 450 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 SLC12A1Q13621 1099 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 CCINQ13939 588 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 TAZQ16635 292 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 ANKRD20A8PQ5CZ79 823 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 MEI1Q5TIA1 1274 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 ZNF783Q6ZMS7 281 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 EXD1Q8NHP7 514 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 PCDH19Q8TAB3 1148 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 RNF25Q96BH1 459 aaPredicted RBP22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 ALG14Q96F25 216 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 NELL2Q99435 816 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 DNAI1Q9UI46 699 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 INTS6Q9UL03 887 aaKnown RBP22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 OR51B4Q9Y5P0 310 aa22.77■■□□□ 1.24
MCF2L2-209ENST00000475664 MUC3AQ02505 3323 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 ILVBLA1L0T0 632 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 TBC1D3BA6NDS4 549 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 PRRT4C9JH25 899 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 ZRANB2O95218 330 aaKnown RBP eCLIP22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 PDGFBP01127 241 aaPredicted RBP22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 MZF1P28698 734 aaPredicted RBP22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 CDKN2BP42772 138 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 PLK1P53350 603 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 RWDD2BP57060 319 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 UBXN2BQ14CS0 331 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 PLEKHG6Q3KR16 790 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 FUT11Q495W5 492 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 ODF2Q5BJF6 829 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 PITRM1Q5JRX3 1037 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 TMEM215Q68D42 235 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 MFSD7Q6UXD7 560 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 ADIPOR2Q86V24 386 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 RCOR2Q8IZ40 523 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 AHI1Q8N157 1196 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 UMODL1-AS1Q8N2C9 162 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 UBL4BQ8N7F7 174 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 TRIM44Q96DX7 344 aaPredicted RBP22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 RBM41Q96IZ5 413 aaKnown RBP22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 RNF157Q96PX1 679 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 FEM1AQ9BSK4 669 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 KLC2Q9H0B6 622 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 NOL6Q9H6R4 1146 aaKnown RBP22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 ETNK2Q9NVF9 386 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 DONSONQ9NYP3 566 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 MTF2Q9Y483 593 aaPredicted RBP22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 MFHAS1Q9Y4C4 1052 aa22.76■■□□□ 1.23
MCF2L2-209ENST00000475664 NUP205Q92621 2012 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 K7EQS6 105 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 KIF5CO60282 957 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 CHRM1P11229 460 aaPredicted RBP22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 CHRNB1P11230 501 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 TNFRSF4P43489 277 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 GNA12Q03113 381 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 DMC1Q14565 340 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 EIF4HQ15056 248 aaKnown RBP22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 RNF219Q5W0B1 726 aaPredicted RBP22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 CWF19L1Q69YN2 538 aaKnown RBP22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 SPOCD1Q6ZMY3 1216 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 APCDD1Q8J025 514 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 C17orf53Q8N3J3 647 aaPredicted RBP22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 NPWQ8N729 165 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 PQLC3Q8N755 202 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 PJA1Q8NG27 643 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 OSBPL6Q9BZF3 934 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 EPHX3Q9H6B9 360 aa22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 MUC22E2RYF6 1773 aaPredicted RBP22.75■■□□□ 1.23
MCF2L2-209ENST00000475664 A0A0D9SEW6 157 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 FAM170BA6NMN3 283 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 RAMP2O60895 175 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 FZD5Q13467 585 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 ZNF569Q5MCW4 686 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 AFMIDQ63HM1 303 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 MBLAC2Q68D91 279 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 TMCO3Q6UWJ1 677 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 NUDT18Q6ZVK8 323 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 CCDC105Q8IYK2 499 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 MUC3BQ9H195 1237 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 MFSD1Q9H3U5 465 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 RBM12Q9NTZ6 932 aaKnown RBP22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 STARD13Q9Y3M8 1113 aa22.74■■□□□ 1.23
MCF2L2-209ENST00000475664 NYNRINQ9P2P1 1898 aaKnown RBP22.73■■□□□ 1.23
MCF2L2-209ENST00000475664 ANTXRLA6NF34 631 aa22.73■■□□□ 1.23
MCF2L2-209ENST00000475664 NDST2P52849 883 aa22.73■■□□□ 1.23
MCF2L2-209ENST00000475664 YBEYP58557 167 aaPredicted RBP22.73■■□□□ 1.23
MCF2L2-209ENST00000475664 COPS2P61201 443 aa22.73■■□□□ 1.23
MCF2L2-209ENST00000475664 LRRC32Q14392 662 aa22.73■■□□□ 1.23
MCF2L2-209ENST00000475664 RPS6KA1Q15418 735 aa22.73■■□□□ 1.23
MCF2L2-209ENST00000475664 PPP2R5EQ16537 467 aa22.73■■□□□ 1.23
MCF2L2-209ENST00000475664 FBXO43Q4G163 708 aa22.73■■□□□ 1.23
MCF2L2-209ENST00000475664 DGKKQ5KSL6 1271 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms