RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 HNRNPA1L2Q32P51 320 aaKnown RBP12.63□□□□□ -0.39
SSR1-205ENST00000475213 CCDC183Q5T5S1 534 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 SH3PXD2AQ5TCZ1 1133 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 NAA35Q5VZE5 725 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 ZNF776Q68DI1 518 aaPredicted RBP12.63□□□□□ -0.39
SSR1-205ENST00000475213 C14orf80Q86SX3 495 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 ZNF677Q86XU0 584 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 DHX40Q8IX18 779 aaKnown RBP12.63□□□□□ -0.39
SSR1-205ENST00000475213 SLC20A1Q8WUM9 679 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 NT5C3BQ969T7 300 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 PGAP3Q96FM1 320 aaPredicted RBP12.63□□□□□ -0.39
SSR1-205ENST00000475213 RPL10LQ96L21 214 aaKnown RBP12.63□□□□□ -0.39
SSR1-205ENST00000475213 RPRD1AQ96P16 312 aaPredicted RBP12.63□□□□□ -0.39
SSR1-205ENST00000475213 GTPBP2Q9BX10 602 aaKnown RBP12.63□□□□□ -0.39
SSR1-205ENST00000475213 RSPH9Q9H1X1 276 aaPredicted RBP12.63□□□□□ -0.39
SSR1-205ENST00000475213 WDCPQ9H6R7 721 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 NLRC4Q9NPP4 1024 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 ARHGEF38Q9NXL2 777 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 SUSD2Q9UGT4 822 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 SLCO3A1Q9UIG8 710 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 NOCTQ9UK39 431 aaKnown RBP12.63□□□□□ -0.39
SSR1-205ENST00000475213 VANGL2Q9ULK5 521 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 STAP1Q9ULZ2 295 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 CHD8Q9HCK8 2581 aa12.63□□□□□ -0.39
SSR1-205ENST00000475213 ITIH6Q6UXX5 1313 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 LGALS16A8MUM7 142 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 GOLGA8SH3BPF8 625 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 I6L893 689 aaPredicted RBP12.62□□□□□ -0.39
SSR1-205ENST00000475213 SYPP08247 313 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 ZNF18P17022 549 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 CHRNB2P17787 502 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 CXCR3P49682 368 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 STK19P49842 368 aaPredicted RBP12.62□□□□□ -0.39
SSR1-205ENST00000475213 FMO1Q01740 532 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 CDR2Q01850 454 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 NCAPHQ15003 741 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 SYCP1Q15431 976 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 SLC25A52Q3SY17 297 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 TTC31Q49AM3 519 aaPredicted RBP12.62□□□□□ -0.39
SSR1-205ENST00000475213 C5orf22Q49AR2 442 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 BRMS1LQ5PSV4 323 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 C9orf64Q5T6V5 341 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 RNF219Q5W0B1 726 aaPredicted RBP12.62□□□□□ -0.39
SSR1-205ENST00000475213 CXorf57Q6NSI4 855 aaKnown RBP12.62□□□□□ -0.39
SSR1-205ENST00000475213 TRNP1Q6NT89 227 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 ZCCHC9Q8N567 271 aaKnown RBP12.62□□□□□ -0.39
SSR1-205ENST00000475213 MINDY1Q8N5J2 469 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 MSANTD4Q8NCY6 345 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 ANKRD20A12PQ8NF67 263 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 OR2I1PQ8NGU4 316 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 TBCBQ99426 244 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 BTBD1Q9H0C5 482 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 TKTL2Q9H0I9 626 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 SIK2Q9H0K1 926 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 MIR1-1HGQ9H1L0 117 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 PCED1AQ9H1Q7 454 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 HSD3B7Q9H2F3 369 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 C6orf106Q9H6K1 298 aaPredicted RBP12.62□□□□□ -0.39
SSR1-205ENST00000475213 ANLNQ9NQW6 1124 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 TMEM59LQ9UK28 342 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 DAAM1Q9Y4D1 1078 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 CABIN1Q9Y6J0 2220 aa12.62□□□□□ -0.39
SSR1-205ENST00000475213 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 EDDM13A0A1B0GTR0 161 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 A0A1B0GTW7 788 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 LRRC10BA6NIK2 292 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 OPHN1O60890 802 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 RNASEH1O60930 286 aaKnown RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 SEMA4FO95754 770 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 F9P00740 461 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 CYP1A1P04798 512 aaPredicted RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 CEACAM1P13688 526 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 CDK11BP21127 795 aaKnown RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 CSRP1P21291 193 aaKnown RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 PMLP29590 882 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 FLT3P36888 993 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 STAT1P42224 750 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 PLK1P53350 603 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 OXCT1P55809 520 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 UBXN1Q04323 297 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 DEUP1Q05D60 604 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 SULT2A1Q06520 285 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 ZNF177Q13360 481 aaPredicted RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 SND1Q7KZF4 910 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSR1-205ENST00000475213 APTXQ7Z2E3 356 aaKnown RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 HDDC3Q8N4P3 179 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 DEFB124Q8NES8 71 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 OR52K2Q8NGK3 314 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 C1orf216Q8TAB5 229 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 PTPRN2Q92932 1015 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 ALG14Q96F25 216 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 PCMTD1Q96MG8 357 aaPredicted RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 SPAG5Q96R06 1193 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 PABPC3Q9H361 631 aaKnown RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 SGK2Q9HBY8 427 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 TMEM63CQ9P1W3 806 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 EIF2B4Q9UI10 523 aaKnown RBP12.61□□□□□ -0.39
SSR1-205ENST00000475213 SCML1Q9UN30 329 aa12.61□□□□□ -0.39
SSR1-205ENST00000475213 SNX10Q9Y5X0 201 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms