RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 TDGQ13569 410 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 GAB4Q2WGN9 574 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 C6orf118Q5T5N4 469 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 CXorf57Q6NSI4 855 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 NPNTQ6UXI9 565 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 SETD3Q86TU7 594 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 CREG2Q8IUH2 290 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 ARHGAP12Q8IWW6 846 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 UMODL1-AS1Q8N2C9 162 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 NAT16Q8N8M0 369 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 ZNF557Q8N988 423 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 NETO2Q8NC67 525 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 MAIP1Q8WWC4 291 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 XPO6Q96QU8 1125 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 NAP1L3Q99457 506 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 KLC2Q9H0B6 622 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 NOL6Q9H6R4 1146 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 CDC23Q9UJX2 597 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 CLEC4EQ9ULY5 219 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 TBC1D30Q9Y2I9 924 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 HEY1Q9Y5J3 304 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 COL6A3P12111 3177 aa12.88□□□□□ -0.35
TRAPPC12-217ENST00000473348 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 NARSO43776 548 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 RAMP2O60895 175 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 MAP3K6O95382 1288 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 BMP1P13497 986 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 GJA4P35212 333 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 PAFAH1B1P43034 410 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 NDST2P52849 883 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 OTUD4Q01804 1114 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 GNA12Q03113 381 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 LMAN2Q12907 356 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 NOMO1Q15155 1222 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 SIX1Q15475 284 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 FSCBQ5H9T9 825 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 RNF219Q5W0B1 726 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 AFMIDQ63HM1 303 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 C12orf40Q86WS4 652 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 TP53INP2Q8IXH6 220 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 CCDC33Q8N5R6 958 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 OR52K2Q8NGK3 314 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 FIBINQ8TAL6 211 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 ACTL9Q8TC94 416 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 P3H4Q92791 437 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 DNASE1L2Q92874 299 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 ASB2Q96Q27 587 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 FAM118BQ9BPY3 351 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 SLC2A11Q9BYW1 496 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 SLC39A8Q9C0K1 460 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 MUC3BQ9H195 1237 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 LRRC19Q9H756 370 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 DNAJC17Q9NVM6 304 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 DTLQ9NZJ0 730 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 SAE1Q9UBE0 346 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 RNF14Q9UBS8 474 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 R3HDM2Q9Y2K5 976 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 MRFAP1Q9Y605 127 aa12.87□□□□□ -0.35
TRAPPC12-217ENST00000473348 ILVBLA1L0T0 632 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 RASA4BC9J798 803 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 DFFAO00273 331 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 PDE2AO00408 941 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 RASA4O43374 803 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 TULP3O75386 442 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 SRFP11831 508 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 HLA-FP30511 346 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 CD70P32970 193 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 ACVRL1P37023 503 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 CSKP41240 450 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 SOX9P48436 509 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 NR2C2P49116 596 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 DGKGP49619 791 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 OXCT1P55809 520 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 YBEYP58557 167 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 KDSRQ06136 332 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 CKAP4Q07065 602 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 GALNT2Q10471 571 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 SLC10A2Q12908 348 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 TUBB2AQ13885 445 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 POLD3Q15054 466 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 PARP15Q460N3 678 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 ASTLQ6HA08 431 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 ZNF783Q6ZMS7 281 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 ZNF354CQ86Y25 554 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 OR7D4Q8NG98 312 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 HMCESQ96FZ2 354 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 TUBB2BQ9BVA1 445 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 MAGEH1Q9H213 219 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 TRPV5Q9NQA5 729 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 ABCB8Q9NUT2 735 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 KIAA1522Q9P206 1035 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 GGA2Q9UJY4 613 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 DUSP12Q9UNI6 340 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 RAD54BQ9Y620 910 aa12.86□□□□□ -0.35
TRAPPC12-217ENST00000473348 F5P12259 2224 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms